Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2542

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
3,001,718	+		Pf6N2E2_2541	0.71	-0.6
3,001,718	+		Pf6N2E2_2541	0.71	-0.1
3,001,719	-		Pf6N2E2_2541	0.71	+1.0
3,001,719	-		Pf6N2E2_2541	0.71	-2.2
3,001,794	+		Pf6N2E2_2541	0.75	+0.8
3,001,794	+		Pf6N2E2_2541	0.75	-0.5
3,001,794	+		Pf6N2E2_2541	0.75	-0.9
3,001,795	-		Pf6N2E2_2541	0.75	-0.9
3,001,795	-		Pf6N2E2_2541	0.75	-0.9
3,001,795	-		Pf6N2E2_2541	0.75	-1.3
3,001,795	-		Pf6N2E2_2541	0.75	+0.5
3,002,004	+		Pf6N2E2_2541	0.86	+0.5
3,002,004	+		Pf6N2E2_2541	0.86	+0.4
3,002,005	-		Pf6N2E2_2541	0.86	+0.3
3,002,005	-		Pf6N2E2_2541	0.86	-1.6
3,002,005	-		Pf6N2E2_2541	0.86	-1.2
3,002,005	-		Pf6N2E2_2541	0.86	+1.5
3,002,121	+				-0.1
3,002,121	+				-1.5
3,002,121	+				+0.5
3,002,122	-				-1.1
3,002,122	-				+0.2
3,002,122	-				+0.3
3,002,122	-				-1.5
3,002,296	+				-0.9
3,002,296	+				+1.0
3,002,297	-				-1.3
3,002,297	-				-0.5
3,002,454	+				+0.8
3,002,455	-				+1.0
3,002,470	-				+0.1
3,002,565	+				+0.8
3,002,565	+				-1.3
3,002,565	+				+0.8
3,002,565	+				+0.8
3,002,565	+				-0.4
3,002,565	+				+0.6
3,002,565	+				+0.1
3,002,565	+				+0.4
3,002,565	+				-0.2
3,002,566	-				+0.2
3,002,566	-				+1.0
3,002,566	-				-1.5
3,002,566	-				-0.1
3,002,566	-				+0.6
3,002,566	-				-1.1
3,002,577	-				+0.2
3,002,577	-				+0.3
3,002,577	-				+0.4
3,002,577	-				-0.8
3,002,588	+				+0.0
3,002,588	+				-0.8
3,002,588	+				+0.5
3,002,588	+				+0.5
3,002,625	-				+1.5
3,002,800	+		Pf6N2E2_2542	0.13	+0.5
3,002,800	+		Pf6N2E2_2542	0.13	+0.2
3,002,800	+		Pf6N2E2_2542	0.13	-0.6
3,002,800	+		Pf6N2E2_2542	0.13	+1.0
3,002,801	-		Pf6N2E2_2542	0.13	+0.0
3,002,801	-		Pf6N2E2_2542	0.13	-0.5
3,002,801	-		Pf6N2E2_2542	0.13	-0.3
3,002,806	+		Pf6N2E2_2542	0.14	-1.6
3,002,806	+		Pf6N2E2_2542	0.14	+0.8
3,002,842	+		Pf6N2E2_2542	0.16	+0.6
3,002,851	+		Pf6N2E2_2542	0.16	+0.3
3,002,851	+		Pf6N2E2_2542	0.16	-1.3
3,002,852	-		Pf6N2E2_2542	0.16	+0.0
3,003,007	+		Pf6N2E2_2542	0.25	+0.7
3,003,007	+		Pf6N2E2_2542	0.25	+0.2
3,003,008	-		Pf6N2E2_2542	0.25	-0.8
3,003,008	-		Pf6N2E2_2542	0.25	-0.2
3,003,008	-		Pf6N2E2_2542	0.25	+0.0
3,003,032	+		Pf6N2E2_2542	0.26	+0.1
3,003,112	+		Pf6N2E2_2542	0.31	-0.2
3,003,113	-		Pf6N2E2_2542	0.31	-0.2
3,003,113	-		Pf6N2E2_2542	0.31	-0.3
3,003,245	-		Pf6N2E2_2542	0.38	+0.1
3,003,359	+		Pf6N2E2_2542	0.45	-0.3
3,003,360	-		Pf6N2E2_2542	0.45	+0.2
3,003,360	-		Pf6N2E2_2542	0.45	+0.3
3,003,419	+		Pf6N2E2_2542	0.48	+0.7
3,003,511	+		Pf6N2E2_2542	0.53	+2.4
3,003,625	+		Pf6N2E2_2542	0.60	-0.2
3,003,625	+		Pf6N2E2_2542	0.60	-0.8
3,003,625	+		Pf6N2E2_2542	0.60	+0.9
3,003,625	+		Pf6N2E2_2542	0.60	-1.2
3,003,625	+		Pf6N2E2_2542	0.60	+1.0
3,003,625	+		Pf6N2E2_2542	0.60	+0.0
3,003,625	+		Pf6N2E2_2542	0.60	+1.5
3,003,626	-		Pf6N2E2_2542	0.60	+0.2
3,003,626	-		Pf6N2E2_2542	0.60	-0.7
3,003,626	-		Pf6N2E2_2542	0.60	+0.3
3,003,626	-		Pf6N2E2_2542	0.60	+0.4
3,003,626	-		Pf6N2E2_2542	0.60	-0.3
3,003,626	-		Pf6N2E2_2542	0.60	-0.4
3,003,626	-		Pf6N2E2_2542	0.60	+0.0
3,003,626	-		Pf6N2E2_2542	0.60	-1.0
3,003,626	-		Pf6N2E2_2542	0.60	-0.1
3,003,629	+		Pf6N2E2_2542	0.60	+1.2
3,003,629	+		Pf6N2E2_2542	0.60	-0.1
3,003,630	-		Pf6N2E2_2542	0.60	-0.2
3,003,630	-		Pf6N2E2_2542	0.60	-2.0
3,003,787	+		Pf6N2E2_2542	0.69	+0.5
3,003,788	-		Pf6N2E2_2542	0.69	-0.3
3,003,788	-		Pf6N2E2_2542	0.69	+0.7
3,003,788	-		Pf6N2E2_2542	0.69	+1.1
3,003,884	+		Pf6N2E2_2542	0.74	+0.6
3,004,064	+		Pf6N2E2_2542	0.84	+2.0
3,004,065	-		Pf6N2E2_2542	0.85	+0.3
3,004,065	-		Pf6N2E2_2542	0.85	-0.8
3,004,123	+		Pf6N2E2_2542	0.88	-1.4
3,004,124	-		Pf6N2E2_2542	0.88	+1.6
3,004,399	+				+0.7
3,004,399	+				+0.6
3,004,400	-				-0.6
3,004,400	-				-0.6
3,004,400	-				-1.0
3,004,400	-				+0.3
3,004,400	-				-1.4
3,004,400	-				+0.6
3,004,400	-				+0.3
3,004,568	+		Pf6N2E2_2543	0.13	+0.8
3,004,569	-		Pf6N2E2_2543	0.13	-0.8
3,004,570	+		Pf6N2E2_2543	0.13	-0.6
3,004,570	+		Pf6N2E2_2543	0.13	-0.6
3,004,570	+		Pf6N2E2_2543	0.13	-1.2
3,004,570	+		Pf6N2E2_2543	0.13	-1.5
3,004,570	+		Pf6N2E2_2543	0.13	-0.6
3,004,570	+		Pf6N2E2_2543	0.13	-0.1
3,004,570	+		Pf6N2E2_2543	0.13	+0.7
3,004,570	+		Pf6N2E2_2543	0.13	-1.0
3,004,570	+		Pf6N2E2_2543	0.13	+0.6
3,004,571	-		Pf6N2E2_2543	0.13	+0.5
3,004,571	-		Pf6N2E2_2543	0.13	+0.1
3,004,571	-		Pf6N2E2_2543	0.13	+0.0
3,004,571	-		Pf6N2E2_2543	0.13	+0.8
3,004,571	-		Pf6N2E2_2543	0.13	-0.1
3,004,571	-		Pf6N2E2_2543	0.13	+0.3
3,004,571	-		Pf6N2E2_2543	0.13	-0.4
3,004,571	-		Pf6N2E2_2543	0.13	-1.5
3,004,571	-		Pf6N2E2_2543	0.13	-0.6
3,004,571	-		Pf6N2E2_2543	0.13	-0.5
3,004,680	-		Pf6N2E2_2543	0.19	+0.7
3,004,744	+		Pf6N2E2_2543	0.23	+0.0
3,004,744	+		Pf6N2E2_2543	0.23	-1.2
3,004,745	-		Pf6N2E2_2543	0.23	-1.9
3,004,745	-		Pf6N2E2_2543	0.23	-0.9
3,005,011	+		Pf6N2E2_2543	0.38	-1.0
3,005,011	+		Pf6N2E2_2543	0.38	+0.2
3,005,012	-		Pf6N2E2_2543	0.38	-0.6
3,005,012	-		Pf6N2E2_2543	0.38	-0.5
3,005,213	+		Pf6N2E2_2543	0.50	-0.3
3,005,214	-		Pf6N2E2_2543	0.50	-0.5
3,005,214	-		Pf6N2E2_2543	0.50	-0.7
3,005,214	-		Pf6N2E2_2543	0.50	+0.7
3,005,214	-		Pf6N2E2_2543	0.50	-0.8
3,005,219	+		Pf6N2E2_2543	0.50	-0.4
3,005,220	-		Pf6N2E2_2543	0.50	-0.3