Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02653

Experiment: PYE with CHIR-090 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 2 ug/mL
2,806,198	-		CCNA_02652	0.40	-1.3
2,806,198	-		CCNA_02652	0.40	-1.9
2,806,209	-		CCNA_02652	0.40	-0.2
2,806,312	+		CCNA_02652	0.47	+0.7
2,806,322	+		CCNA_02652	0.48	-1.5
2,806,382	+		CCNA_02652	0.52	+0.7
2,806,382	+		CCNA_02652	0.52	-0.7
2,806,382	+		CCNA_02652	0.52	-0.1
2,806,382	+		CCNA_02652	0.52	-0.4
2,806,383	+		CCNA_02652	0.52	-0.3
2,806,390	-		CCNA_02652	0.52	-1.5
2,806,390	-		CCNA_02652	0.52	+0.8
2,806,390	-		CCNA_02652	0.52	-1.1
2,806,400	-		CCNA_02652	0.53	-2.9
2,806,416	+		CCNA_02652	0.54	-2.0
2,806,467	+		CCNA_02652	0.58	+0.1
2,806,476	-		CCNA_02652	0.58	-0.0
2,806,491	+		CCNA_02652	0.59	+0.1
2,806,506	-		CCNA_02652	0.60	-1.9
2,806,506	-		CCNA_02652	0.60	-1.2
2,806,516	-		CCNA_02652	0.61	-0.2
2,806,516	-		CCNA_02652	0.61	+1.0
2,806,516	-		CCNA_02652	0.61	+0.1
2,806,516	-		CCNA_02652	0.61	-1.4
2,806,517	+		CCNA_02652	0.61	-2.0
2,806,538	+		CCNA_02652	0.62	-1.8
2,806,539	+		CCNA_02652	0.62	+0.8
2,806,539	+		CCNA_02652	0.62	-0.6
2,806,553	+		CCNA_02652	0.63	+0.5
2,806,553	+		CCNA_02652	0.63	-0.8
2,806,561	+		CCNA_02652	0.64	-2.2
2,806,561	-		CCNA_02652	0.64	+0.8
2,806,561	-		CCNA_02652	0.64	+0.5
2,806,569	-		CCNA_02652	0.64	-0.0
2,806,724	+		CCNA_02652	0.75	+1.0
2,806,724	+		CCNA_02652	0.75	+2.2
2,806,742	-		CCNA_02652	0.76	-0.3
2,806,760	-		CCNA_02652	0.77	+0.9
2,806,760	-		CCNA_02652	0.77	-1.5
2,806,771	-		CCNA_02652	0.78	-1.0
2,806,840	-		CCNA_02652	0.82	-0.2
2,806,841	-		CCNA_02652	0.82	+1.5
2,806,852	+		CCNA_02652	0.83	+0.2
2,806,939	+		CCNA_02652	0.89	+0.1
2,806,939	+		CCNA_02652	0.89	+0.4
2,806,947	-		CCNA_02652	0.90	+0.2
2,806,947	-		CCNA_02652	0.90	+1.3
2,806,953	-				+0.3
2,806,961	+				+0.9
2,806,974	+				+0.8
2,806,979	+				+1.4
2,807,019	+				-0.7
2,807,051	+				-0.2
2,807,069	+				+0.2
2,807,077	-				-1.0
2,807,091	+				+0.2
2,807,116	+				+0.2
2,807,117	+				-1.6
2,807,137	-				-2.9
2,807,169	+				+1.1
2,807,169	+				+0.6
2,807,169	+				-0.9
2,807,169	+				-1.3
2,807,174	+				-1.0
2,807,177	-				+0.5
2,807,177	-				-0.7
2,807,225	-				-0.5
2,807,357	-		CCNA_02653	0.20	-0.1
2,807,368	+		CCNA_02653	0.21	+0.0
2,807,373	+		CCNA_02653	0.22	-1.5
2,807,380	-		CCNA_02653	0.23	-0.4
2,807,388	-		CCNA_02653	0.23	-0.1
2,807,400	-		CCNA_02653	0.25	-0.7
2,807,407	+		CCNA_02653	0.26	-0.5
2,807,432	+		CCNA_02653	0.28	+0.4
2,807,473	-		CCNA_02653	0.33	-0.7
2,807,502	+		CCNA_02653	0.36	-2.7
2,807,521	+		CCNA_02653	0.38	-0.9
2,807,521	+		CCNA_02653	0.38	-0.4
2,807,521	+		CCNA_02653	0.38	-1.0
2,807,521	+		CCNA_02653	0.38	-3.2
2,807,529	-		CCNA_02653	0.39	-1.0
2,807,529	-		CCNA_02653	0.39	-0.3
2,807,529	-		CCNA_02653	0.39	-1.2
2,807,529	-		CCNA_02653	0.39	+0.6
2,807,529	-		CCNA_02653	0.39	+1.8
2,807,529	-		CCNA_02653	0.39	-1.0
2,807,531	+		CCNA_02653	0.39	-1.1
2,807,554	-		CCNA_02653	0.42	-2.0
2,807,554	-		CCNA_02653	0.42	-0.0
2,807,554	-		CCNA_02653	0.42	+0.5
2,807,573	+		CCNA_02653	0.44	-2.3
2,807,581	-		CCNA_02653	0.45	+0.2
2,807,592	+		CCNA_02653	0.46	-2.8
2,807,617	+		CCNA_02653	0.49	-0.1
2,807,648	-		CCNA_02653	0.52	-0.7
2,807,658	-		CCNA_02653	0.53	+0.9
2,807,668	+		CCNA_02653	0.55	-1.6
2,807,668	+		CCNA_02653	0.55	+0.5
2,807,676	-		CCNA_02653	0.55	-0.0
2,807,676	-		CCNA_02653	0.55	+0.6
2,807,676	-		CCNA_02653	0.55	-1.6
2,807,688	+		CCNA_02653	0.57	-0.1
2,807,711	-		CCNA_02653	0.59	+1.5
2,807,732	+		CCNA_02653	0.62	-0.9
2,807,735	-		CCNA_02653	0.62	-0.3
2,807,788	+		CCNA_02653	0.68	+0.9
2,807,808	+		CCNA_02653	0.70	-0.2
2,807,808	+		CCNA_02653	0.70	-0.7
2,807,808	+		CCNA_02653	0.70	-1.6
2,807,808	+		CCNA_02653	0.70	-2.3
2,807,816	+		CCNA_02653	0.71	-1.3
2,807,816	+		CCNA_02653	0.71	+0.6
2,807,816	+		CCNA_02653	0.71	-1.3
2,807,824	-		CCNA_02653	0.72	+0.5
2,807,824	-		CCNA_02653	0.72	+1.8
2,807,854	+		CCNA_02653	0.75	+0.4
2,807,865	-		CCNA_02653	0.76	-1.2
2,807,882	+		CCNA_02653	0.78	+0.7
2,807,903	-		CCNA_02653	0.81	-1.2
2,807,914	+		CCNA_02653	0.82	-1.0
2,807,924	+		CCNA_02653	0.83	+0.3
2,807,960	+		CCNA_02653	0.87	-0.2
2,807,960	+		CCNA_02653	0.87	-1.4
2,807,968	-		CCNA_02653	0.88	+0.8
2,807,972	+		CCNA_02653	0.88	-1.3
2,807,972	+		CCNA_02653	0.88	-2.9
2,807,972	+		CCNA_02653	0.88	-1.5
2,807,980	-		CCNA_02653	0.89	+1.8
2,807,980	-		CCNA_02653	0.89	-0.2
2,807,981	+		CCNA_02653	0.89	-1.0
2,807,981	+		CCNA_02653	0.89	-2.2
2,808,028	+				-0.1
2,808,041	-				-0.8
2,808,052	+				-1.6
2,808,052	+				+0.3
2,808,052	+				-0.7
2,808,052	+				-3.0
2,808,060	-				+0.0
2,808,060	-				-1.6
2,808,077	+				-0.8
2,808,080	-				-1.5
2,808,116	+				-2.0
2,808,129	+				-0.9
2,808,155	-				-0.4
2,808,219	+				-1.1
2,808,219	+				-1.7
2,808,219	+				-1.7
2,808,227	-				-2.1
2,808,229	+				-2.6
2,808,229	+				-1.3
2,808,237	-				-0.6
2,808,237	-				+1.8
2,808,265	-		CCNA_02654	0.15	-0.5
2,808,270	-		CCNA_02654	0.16	-0.2
2,808,273	+		CCNA_02654	0.17	-1.0
2,808,273	+		CCNA_02654	0.17	+0.7
2,808,273	+		CCNA_02654	0.17	+0.5
2,808,273	+		CCNA_02654	0.17	-0.7
2,808,273	+		CCNA_02654	0.17	-0.2
2,808,273	+		CCNA_02654	0.17	-0.7
2,808,273	+		CCNA_02654	0.17	+0.9
2,808,281	-		CCNA_02654	0.19	-2.6
2,808,281	-		CCNA_02654	0.19	-0.6
2,808,281	-		CCNA_02654	0.19	-0.6
2,808,281	-		CCNA_02654	0.19	-0.0
2,808,281	-		CCNA_02654	0.19	+0.1
2,808,281	-		CCNA_02654	0.19	+0.8
2,808,281	-		CCNA_02654	0.19	+0.2
2,808,281	-		CCNA_02654	0.19	-0.3
2,808,281	-		CCNA_02654	0.19	+2.8
2,808,286	+		CCNA_02654	0.21	-1.0
2,808,304	-		CCNA_02654	0.25	-0.6
2,808,366	-		CCNA_02654	0.42	-1.2
2,808,368	-		CCNA_02654	0.42	-0.5
2,808,386	+		CCNA_02654	0.47	-0.2
2,808,410	+		CCNA_02654	0.53	-1.5
2,808,418	-		CCNA_02654	0.56	+0.5
2,808,444	+		CCNA_02654	0.62	-1.0
2,808,513	+		CCNA_02654	0.81	-0.5
2,808,550	+				-1.5
2,808,550	+				-1.6
2,808,584	-				+0.9
2,808,626	-				-0.9
2,808,630	+				+0.6
2,808,632	-				+0.4
2,808,636	+				-1.5
2,808,636	+				-1.6
2,808,636	+				-0.9
2,808,636	+				-2.3
2,808,636	+				-0.4
2,808,636	+				+0.1
2,808,643	+				+2.0
2,808,644	-				+0.5
2,808,644	-				+0.8
2,808,644	-				+0.1
2,808,644	-				-0.4
2,808,645	-				+0.2
2,808,649	+				-3.4
2,808,649	+				-1.1
2,808,649	+				-0.9
2,808,657	-				+1.7
2,808,657	-				-0.9
2,808,657	-				-1.7
2,808,680	-				-2.7
2,808,680	-				+0.5
2,808,687	+				-1.6
2,808,712	-				-1.3
2,808,719	+				-2.2
2,808,727	-				+0.9
2,808,756	+				-0.1
2,808,756	+				-1.0
2,808,760	+				-0.0
2,808,799	-				-2.0
2,808,829	+		CCNA_02655	0.10	-1.1
2,808,831	+		CCNA_02655	0.10	-0.0
2,808,856	+		CCNA_02655	0.15	-0.0
2,808,884	-		CCNA_02655	0.21	-1.0
2,808,941	-		CCNA_02655	0.31	-1.0
2,808,950	-		CCNA_02655	0.33	-2.6
2,808,950	-		CCNA_02655	0.33	-0.6
2,808,954	-		CCNA_02655	0.34	+2.2
2,808,967	+		CCNA_02655	0.36	+0.9
2,808,975	-		CCNA_02655	0.38	+0.6
2,808,994	+		CCNA_02655	0.42	+0.5
2,809,001	+		CCNA_02655	0.43	-0.8
2,809,002	-		CCNA_02655	0.43	+0.5
2,809,002	-		CCNA_02655	0.43	-0.4
2,809,032	-		CCNA_02655	0.49	-0.0
2,809,042	+		CCNA_02655	0.51	-1.2