Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01103

Experiment: PYE with CHIR-090 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 2 ug/mL
1,208,033	-				+0.3
1,208,057	-				+1.3
1,208,068	+				+1.3
1,208,073	+				-0.6
1,208,081	-				+0.5
1,208,081	-				+0.3
1,208,081	-				-0.0
1,208,153	-				+0.6
1,208,195	+				-0.1
1,208,204	-				+0.1
1,208,257	-				+1.9
1,208,268	+				+0.7
1,208,277	-		CCNA_01102	0.10	-1.8
1,208,300	+		CCNA_01102	0.14	-1.7
1,208,306	-		CCNA_01102	0.15	-0.8
1,208,308	-		CCNA_01102	0.15	+0.7
1,208,343	+		CCNA_01102	0.21	-0.1
1,208,353	+		CCNA_01102	0.23	-0.7
1,208,361	-		CCNA_01102	0.24	-0.2
1,208,388	-		CCNA_01102	0.28	+0.1
1,208,394	+		CCNA_01102	0.29	-0.5
1,208,442	+		CCNA_01102	0.38	-2.3
1,208,449	+		CCNA_01102	0.39	-0.0
1,208,457	-		CCNA_01102	0.40	-0.2
1,208,489	+		CCNA_01102	0.45	-0.4
1,208,489	+		CCNA_01102	0.45	-2.3
1,208,489	+		CCNA_01102	0.45	+1.4
1,208,489	+		CCNA_01102	0.45	-0.7
1,208,497	-		CCNA_01102	0.47	+0.2
1,208,507	-		CCNA_01102	0.48	+0.2
1,208,517	-		CCNA_01102	0.50	+1.6
1,208,517	-		CCNA_01102	0.50	+0.3
1,208,524	+		CCNA_01102	0.51	+0.1
1,208,532	-		CCNA_01102	0.53	-1.5
1,208,545	-		CCNA_01102	0.55	-1.9
1,208,573	+		CCNA_01102	0.59	-1.3
1,208,607	-		CCNA_01102	0.65	+0.3
1,208,635	+		CCNA_01102	0.70	-1.3
1,208,635	+		CCNA_01102	0.70	-0.6
1,208,637	+		CCNA_01102	0.70	-0.3
1,208,643	-		CCNA_01102	0.71	+0.0
1,208,654	+		CCNA_01102	0.73	+0.5
1,208,667	-		CCNA_01102	0.75	-1.3
1,208,730	-		CCNA_01102	0.85	-0.8
1,208,731	+		CCNA_01102	0.86	+0.3
1,208,731	+		CCNA_01102	0.86	+0.9
1,208,741	-		CCNA_01102	0.87	-0.5
1,208,747	+		CCNA_01102	0.88	+0.2
1,208,757	+				+0.7
1,208,792	+				+0.9
1,208,794	-				-0.4
1,208,810	+				-2.2
1,208,813	-				-2.1
1,208,815	-				-1.3
1,208,818	-				-2.6
1,208,818	-				-0.7
1,208,837	-				+0.3
1,208,885	+				-0.6
1,208,885	-				+0.4
1,208,885	-				+1.5
1,208,898	+				+0.5
1,208,898	+				-1.0
1,208,898	-				-3.1
1,208,906	-				-0.1
1,208,951	-				+0.6
1,208,951	-				+0.5
1,209,032	-				-0.8
1,209,101	-		CCNA_01103	0.13	+0.9
1,209,148	-		CCNA_01103	0.18	-0.1
1,209,148	-		CCNA_01103	0.18	-1.3
1,209,243	+		CCNA_01103	0.28	-1.4
1,209,244	-		CCNA_01103	0.28	+0.1
1,209,244	-		CCNA_01103	0.28	+1.9
1,209,244	-		CCNA_01103	0.28	+0.4
1,209,307	-		CCNA_01103	0.34	-0.1
1,209,314	-		CCNA_01103	0.35	-1.5
1,209,339	-		CCNA_01103	0.38	+0.6
1,209,405	-		CCNA_01103	0.45	-0.6
1,209,477	-		CCNA_01103	0.52	+0.6
1,209,538	-		CCNA_01103	0.58	-1.3
1,209,555	-		CCNA_01103	0.60	-0.1
1,209,791	-		CCNA_01103	0.84	-0.3
1,209,850	-				-1.7
1,209,923	-				-0.3
1,209,946	-				+1.9
1,209,959	+				+0.9
1,209,967	-				-0.2
1,209,967	-				+0.3
1,209,967	-				+0.2
1,209,967	-				+1.4