Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0074
Experiment: Formate/Acetate-Sulfate (60/1-30 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/1-30 mM) |
|---|---|---|---|---|---|
| remove | |||||
| 91,091 | - | DVU0074 | 0.23 | -0.3 | |
| 91,125 | - | DVU0074 | 0.31 | +0.4 | |
| 91,170 | - | DVU0074 | 0.41 | -1.0 | |
| 91,191 | + | DVU0074 | 0.46 | -1.2 | |
| 91,191 | + | DVU0074 | 0.46 | -0.1 | |
| 91,191 | + | DVU0074 | 0.46 | -0.9 | |
| 91,199 | - | DVU0074 | 0.48 | -0.4 | |
| 91,199 | - | DVU0074 | 0.48 | +0.1 | |
| 91,199 | - | DVU0074 | 0.48 | -1.2 | |
| 91,246 | + | DVU0074 | 0.58 | -0.8 | |
| 91,381 | - | DVU0074 | 0.89 | -0.5 | |
| 91,459 | - | +0.6 | |||
| 91,497 | + | -1.2 | |||
| 91,520 | + | +0.3 | |||
| 91,520 | + | -0.2 | |||
| 91,562 | + | +0.1 | |||
| 91,570 | - | -1.3 | |||
| 91,585 | - | +0.9 | |||
| 91,585 | - | +0.0 | |||
| 91,599 | - | -0.2 | |||
| 91,611 | + | -0.2 | |||
| 91,619 | - | -0.1 | |||
| 91,637 | - | -0.7 | |||
| 91,664 | + | +0.2 | |||
| 91,728 | - | +1.0 |
Or see this region's nucleotide sequence