Experiment: Formate/Acetate-Sulfate (60/1-30 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0691 and DVU0692 are separated by 532 nucleotides DVU0692 and narH are separated by 3 nucleotides narH and DVU0694 are separated by 12 nucleotides
DVU0691: DVU0691 - membrane protein, putative (TIGR), at 765,035 to 765,994
DVU0691
DVU0692: DVU0692 - molybdopterin oxidoreductase, transmembrane subunit, putative (TIGR), at 766,527 to 767,786
DVU0692
DVU0693: narH - molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative (TIGR), containing cytochrome c heme-binding site (VIMSS_AUTO), at 767,790 to 768,557
narH
DVU0694: DVU0694 - molybdopterin oxidoreductase, molybdopterin-binding subunit, putative (TIGR), at 768,570 to 770,645
DVU0694
Position (kb) 766
767
768 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 765.550 kb on - strand, within DVU0691 at 765.593 kb on - strand, within DVU0691 at 765.669 kb on - strand, within DVU0691 at 765.678 kb on + strand, within DVU0691 at 765.710 kb on + strand, within DVU0691 at 765.743 kb on - strand, within DVU0691 at 765.753 kb on - strand, within DVU0691 at 765.769 kb on - strand, within DVU0691 at 765.791 kb on + strand, within DVU0691 at 765.853 kb on - strand, within DVU0691 at 765.915 kb on + strand at 765.915 kb on + strand at 765.923 kb on - strand at 765.933 kb on + strand at 766.076 kb on + strand at 766.159 kb on + strand at 766.159 kb on + strand at 766.188 kb on + strand at 766.208 kb on + strand at 766.234 kb on - strand at 766.239 kb on - strand at 766.311 kb on + strand at 766.356 kb on - strand at 766.369 kb on + strand at 766.378 kb on - strand at 766.392 kb on - strand at 766.419 kb on - strand at 766.528 kb on + strand at 766.694 kb on - strand, within DVU0692 at 766.724 kb on - strand, within DVU0692 at 766.740 kb on + strand, within DVU0692 at 766.761 kb on - strand, within DVU0692 at 766.771 kb on - strand, within DVU0692 at 766.797 kb on + strand, within DVU0692 at 766.812 kb on - strand, within DVU0692 at 766.819 kb on + strand, within DVU0692 at 766.848 kb on - strand, within DVU0692 at 766.912 kb on + strand, within DVU0692 at 766.918 kb on - strand, within DVU0692 at 766.957 kb on + strand, within DVU0692 at 767.197 kb on + strand, within DVU0692 at 767.304 kb on + strand, within DVU0692 at 767.458 kb on - strand, within DVU0692 at 767.656 kb on + strand, within DVU0692 at 767.696 kb on - strand at 767.778 kb on - strand at 767.794 kb on + strand at 767.939 kb on + strand, within narH at 768.005 kb on + strand, within narH at 768.051 kb on + strand, within narH at 768.066 kb on - strand, within narH at 768.124 kb on - strand, within narH at 768.147 kb on + strand, within narH at 768.154 kb on + strand, within narH at 768.162 kb on - strand, within narH at 768.169 kb on + strand, within narH at 768.310 kb on + strand, within narH at 768.318 kb on - strand, within narH at 768.398 kb on + strand, within narH at 768.411 kb on - strand, within narH at 768.493 kb on - strand at 768.623 kb on - strand at 768.698 kb on + strand at 768.706 kb on - strand at 768.773 kb on - strand at 768.786 kb on - strand, within DVU0694
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfate (60/1-30 mM) remove 765,550 - DVU0691 0.54 -0.0 765,593 - DVU0691 0.58 -0.2 765,669 - DVU0691 0.66 -0.4 765,678 + DVU0691 0.67 -0.5 765,710 + DVU0691 0.70 -0.9 765,743 - DVU0691 0.74 -0.1 765,753 - DVU0691 0.75 -0.5 765,769 - DVU0691 0.76 +1.8 765,791 + DVU0691 0.79 +0.1 765,853 - DVU0691 0.85 +0.9 765,915 + +0.2 765,915 + +0.4 765,923 - +0.2 765,933 + -1.0 766,076 + -0.1 766,159 + +0.0 766,159 + +0.0 766,188 + -0.2 766,208 + +0.1 766,234 - +0.2 766,239 - -0.1 766,311 + -1.4 766,356 - -1.5 766,369 + -0.3 766,378 - -0.1 766,392 - -1.2 766,419 - -0.6 766,528 + -2.2 766,694 - DVU0692 0.13 -1.5 766,724 - DVU0692 0.16 -1.0 766,740 + DVU0692 0.17 -1.0 766,761 - DVU0692 0.19 -1.0 766,771 - DVU0692 0.19 -0.3 766,797 + DVU0692 0.21 +0.1 766,812 - DVU0692 0.23 -1.9 766,819 + DVU0692 0.23 -1.6 766,848 - DVU0692 0.25 +0.4 766,912 + DVU0692 0.31 -0.8 766,918 - DVU0692 0.31 -1.0 766,957 + DVU0692 0.34 -1.6 767,197 + DVU0692 0.53 -1.1 767,304 + DVU0692 0.62 -1.1 767,458 - DVU0692 0.74 -1.6 767,656 + DVU0692 0.90 -0.9 767,696 - -0.4 767,778 - -1.3 767,794 + -1.2 767,939 + narH DVU0693 0.19 -1.6 768,005 + narH DVU0693 0.28 -1.7 768,051 + narH DVU0693 0.34 -0.0 768,066 - narH DVU0693 0.36 -0.5 768,124 - narH DVU0693 0.43 -3.1 768,147 + narH DVU0693 0.46 -2.3 768,154 + narH DVU0693 0.47 -1.4 768,162 - narH DVU0693 0.48 -0.3 768,169 + narH DVU0693 0.49 -1.4 768,310 + narH DVU0693 0.68 -1.3 768,318 - narH DVU0693 0.69 -0.4 768,398 + narH DVU0693 0.79 -0.1 768,411 - narH DVU0693 0.81 -1.6 768,493 - -1.2 768,623 - +0.3 768,698 + -0.4 768,706 - -1.3 768,773 - -2.1 768,786 - DVU0694 0.10 -1.0
Or see this region's nucleotide sequence