Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2170 and HP15_2171 are separated by 51 nucleotides HP15_2171 and HP15_2172 are separated by 251 nucleotides HP15_2172 and HP15_2173 are separated by 21 nucleotides HP15_2173 and HP15_2174 overlap by 4 nucleotides
HP15_2170: HP15_2170 - ABC-type sugar transport system, periplasmic component, at 2,279,786 to 2,281,570
_2170
HP15_2171: HP15_2171 - uracil-DNA glycosylase superfamily, at 2,281,622 to 2,282,071
_2171
HP15_2172: HP15_2172 - nitrorecductase, at 2,282,323 to 2,283,063
_2172
HP15_2173: HP15_2173 - glucokinase, at 2,283,085 to 2,284,050
_2173
HP15_2174: HP15_2174 - 6-phosphogluconate dehydratase, at 2,284,047 to 2,285,879
_2174
Position (kb)
2282
2283
2284 Strain fitness (log2 ratio)
-2
-1
0
1 at 2281.366 kb on + strand, within HP15_2170 at 2281.366 kb on + strand, within HP15_2170 at 2281.374 kb on - strand, within HP15_2170 at 2281.374 kb on - strand, within HP15_2170 at 2281.379 kb on - strand, within HP15_2170 at 2281.547 kb on + strand at 2281.738 kb on - strand, within HP15_2171 at 2281.739 kb on - strand, within HP15_2171 at 2281.755 kb on + strand, within HP15_2171 at 2281.758 kb on + strand, within HP15_2171 at 2281.806 kb on + strand, within HP15_2171 at 2282.095 kb on - strand at 2282.226 kb on + strand at 2282.438 kb on - strand, within HP15_2172 at 2282.555 kb on + strand, within HP15_2172 at 2282.737 kb on + strand, within HP15_2172 at 2282.745 kb on - strand, within HP15_2172 at 2282.745 kb on - strand, within HP15_2172 at 2282.794 kb on - strand, within HP15_2172 at 2282.849 kb on - strand, within HP15_2172 at 2282.923 kb on - strand, within HP15_2172 at 2282.962 kb on + strand, within HP15_2172 at 2283.029 kb on + strand at 2283.057 kb on + strand at 2283.108 kb on - strand at 2283.249 kb on + strand, within HP15_2173 at 2283.297 kb on - strand, within HP15_2173 at 2283.367 kb on + strand, within HP15_2173 at 2283.422 kb on + strand, within HP15_2173 at 2283.422 kb on + strand, within HP15_2173 at 2283.460 kb on + strand, within HP15_2173 at 2283.468 kb on - strand, within HP15_2173 at 2283.575 kb on + strand, within HP15_2173 at 2283.593 kb on - strand, within HP15_2173 at 2283.649 kb on - strand, within HP15_2173 at 2283.742 kb on + strand, within HP15_2173 at 2283.922 kb on - strand, within HP15_2173 at 2284.014 kb on - strand at 2284.036 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 2,281,366 + HP15_2170 0.89 +0.4 2,281,366 + HP15_2170 0.89 -0.6 2,281,374 - HP15_2170 0.89 -0.1 2,281,374 - HP15_2170 0.89 -2.3 2,281,379 - HP15_2170 0.89 -0.1 2,281,547 + +1.3 2,281,738 - HP15_2171 0.26 -0.1 2,281,739 - HP15_2171 0.26 -1.6 2,281,755 + HP15_2171 0.30 -0.4 2,281,758 + HP15_2171 0.30 +0.9 2,281,806 + HP15_2171 0.41 +0.1 2,282,095 - +0.2 2,282,226 + -1.4 2,282,438 - HP15_2172 0.16 -0.1 2,282,555 + HP15_2172 0.31 -1.0 2,282,737 + HP15_2172 0.56 -0.8 2,282,745 - HP15_2172 0.57 +0.2 2,282,745 - HP15_2172 0.57 +0.1 2,282,794 - HP15_2172 0.64 -0.7 2,282,849 - HP15_2172 0.71 -0.6 2,282,923 - HP15_2172 0.81 +0.3 2,282,962 + HP15_2172 0.86 -0.5 2,283,029 + -2.1 2,283,057 + -0.2 2,283,108 - -0.2 2,283,249 + HP15_2173 0.17 +0.3 2,283,297 - HP15_2173 0.22 +0.7 2,283,367 + HP15_2173 0.29 +0.1 2,283,422 + HP15_2173 0.35 -0.1 2,283,422 + HP15_2173 0.35 +0.3 2,283,460 + HP15_2173 0.39 +0.0 2,283,468 - HP15_2173 0.40 -0.9 2,283,575 + HP15_2173 0.51 +0.1 2,283,593 - HP15_2173 0.53 +0.6 2,283,649 - HP15_2173 0.58 +0.4 2,283,742 + HP15_2173 0.68 -0.2 2,283,922 - HP15_2173 0.87 +0.2 2,284,014 - -0.3 2,284,036 + -0.5
Or see this region's nucleotide sequence