Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2019 and HP15_2020 are separated by 33 nucleotides HP15_2020 and HP15_2021 are separated by 532 nucleotides
HP15_2019: HP15_2019 - iron-containing alcohol dehydrogenase, at 2,119,598 to 2,120,755
_2019
HP15_2020: HP15_2020 - succinate-semialdehyde dehydrogenase I, at 2,120,789 to 2,122,258
_2020
HP15_2021: HP15_2021 - membrane protein containing DUF606, at 2,122,791 to 2,123,255
_2021
Position (kb)
2120
2121
2122
2123 Strain fitness (log2 ratio)
-1
0
1 at 2119.843 kb on - strand, within HP15_2019 at 2119.970 kb on - strand, within HP15_2019 at 2119.972 kb on + strand, within HP15_2019 at 2119.985 kb on + strand, within HP15_2019 at 2120.248 kb on - strand, within HP15_2019 at 2120.250 kb on + strand, within HP15_2019 at 2120.332 kb on + strand, within HP15_2019 at 2120.332 kb on + strand, within HP15_2019 at 2120.482 kb on + strand, within HP15_2019 at 2120.585 kb on - strand, within HP15_2019 at 2120.610 kb on + strand, within HP15_2019 at 2120.649 kb on - strand at 2120.701 kb on + strand at 2120.703 kb on + strand at 2120.824 kb on - strand at 2120.838 kb on - strand at 2120.867 kb on + strand at 2120.953 kb on + strand, within HP15_2020 at 2121.076 kb on - strand, within HP15_2020 at 2121.088 kb on + strand, within HP15_2020 at 2121.096 kb on - strand, within HP15_2020 at 2121.160 kb on + strand, within HP15_2020 at 2121.160 kb on + strand, within HP15_2020 at 2121.168 kb on - strand, within HP15_2020 at 2121.170 kb on + strand, within HP15_2020 at 2121.257 kb on + strand, within HP15_2020 at 2121.323 kb on + strand, within HP15_2020 at 2121.336 kb on - strand, within HP15_2020 at 2121.461 kb on - strand, within HP15_2020 at 2121.501 kb on + strand, within HP15_2020 at 2121.649 kb on + strand, within HP15_2020 at 2121.659 kb on + strand, within HP15_2020 at 2121.667 kb on - strand, within HP15_2020 at 2121.701 kb on + strand, within HP15_2020 at 2121.735 kb on - strand, within HP15_2020 at 2121.855 kb on + strand, within HP15_2020 at 2121.855 kb on - strand, within HP15_2020 at 2121.932 kb on + strand, within HP15_2020 at 2121.959 kb on - strand, within HP15_2020 at 2121.971 kb on - strand, within HP15_2020 at 2122.130 kb on + strand at 2122.172 kb on - strand at 2122.172 kb on - strand at 2122.271 kb on - strand at 2122.359 kb on - strand at 2122.426 kb on + strand at 2122.565 kb on + strand at 2122.653 kb on - strand at 2122.668 kb on - strand at 2122.696 kb on + strand at 2122.698 kb on + strand at 2122.706 kb on - strand at 2122.742 kb on + strand at 2122.857 kb on + strand, within HP15_2021 at 2122.881 kb on + strand, within HP15_2021 at 2122.889 kb on - strand, within HP15_2021 at 2123.023 kb on + strand, within HP15_2021 at 2123.070 kb on - strand, within HP15_2021 at 2123.191 kb on + strand, within HP15_2021 at 2123.243 kb on - strand at 2123.251 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 2,119,843 - HP15_2019 0.21 -0.2 2,119,970 - HP15_2019 0.32 +0.5 2,119,972 + HP15_2019 0.32 +0.2 2,119,985 + HP15_2019 0.33 +0.1 2,120,248 - HP15_2019 0.56 +0.3 2,120,250 + HP15_2019 0.56 -0.0 2,120,332 + HP15_2019 0.63 -0.8 2,120,332 + HP15_2019 0.63 -1.2 2,120,482 + HP15_2019 0.76 +0.5 2,120,585 - HP15_2019 0.85 +0.1 2,120,610 + HP15_2019 0.87 +0.1 2,120,649 - -0.5 2,120,701 + -0.2 2,120,703 + +0.9 2,120,824 - +0.3 2,120,838 - -0.3 2,120,867 + -0.1 2,120,953 + HP15_2020 0.11 +0.1 2,121,076 - HP15_2020 0.20 +1.6 2,121,088 + HP15_2020 0.20 +0.9 2,121,096 - HP15_2020 0.21 +0.5 2,121,160 + HP15_2020 0.25 -0.2 2,121,160 + HP15_2020 0.25 +1.4 2,121,168 - HP15_2020 0.26 +0.7 2,121,170 + HP15_2020 0.26 -0.7 2,121,257 + HP15_2020 0.32 +0.5 2,121,323 + HP15_2020 0.36 +0.2 2,121,336 - HP15_2020 0.37 +0.1 2,121,461 - HP15_2020 0.46 +0.5 2,121,501 + HP15_2020 0.48 +0.3 2,121,649 + HP15_2020 0.59 -0.4 2,121,659 + HP15_2020 0.59 +0.8 2,121,667 - HP15_2020 0.60 -0.6 2,121,701 + HP15_2020 0.62 +0.3 2,121,735 - HP15_2020 0.64 +0.1 2,121,855 + HP15_2020 0.73 +0.1 2,121,855 - HP15_2020 0.73 -0.2 2,121,932 + HP15_2020 0.78 -0.4 2,121,959 - HP15_2020 0.80 -0.2 2,121,971 - HP15_2020 0.80 +0.8 2,122,130 + -0.3 2,122,172 - -0.3 2,122,172 - -0.8 2,122,271 - -1.3 2,122,359 - +0.6 2,122,426 + +0.5 2,122,565 + -0.7 2,122,653 - -0.4 2,122,668 - +0.3 2,122,696 + -0.3 2,122,698 + +0.0 2,122,706 - +0.3 2,122,742 + +0.1 2,122,857 + HP15_2021 0.14 -0.3 2,122,881 + HP15_2021 0.19 +0.0 2,122,889 - HP15_2021 0.21 -0.3 2,123,023 + HP15_2021 0.50 +0.1 2,123,070 - HP15_2021 0.60 +1.0 2,123,191 + HP15_2021 0.86 +0.2 2,123,243 - -1.0 2,123,251 + +1.4
Or see this region's nucleotide sequence