Experiment: m.b. Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1043 and HP15_1044 are separated by 56 nucleotides HP15_1044 and HP15_1045 are separated by 71 nucleotides HP15_1045 and HP15_1047 are separated by 114 nucleotides
HP15_1043: HP15_1043 - conserved hypothetical protein, at 1,064,096 to 1,065,163
_1043
HP15_1044: HP15_1044 - lysine exporter protein (LYSE/YGGA), at 1,065,220 to 1,065,858
_1044
HP15_1045: HP15_1045 - 4Fe-4S ferredoxin, iron-sulfur binding domain protein, at 1,065,930 to 1,066,289
_1045
HP15_1047: HP15_1047 - DNA mismatch repair protein MutS, at 1,066,404 to 1,069,034
_1047
Position (kb)
1065
1066 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1064.315 kb on - strand, within HP15_1043 at 1064.350 kb on - strand, within HP15_1043 at 1064.352 kb on + strand, within HP15_1043 at 1064.360 kb on - strand, within HP15_1043 at 1064.386 kb on + strand, within HP15_1043 at 1064.474 kb on - strand, within HP15_1043 at 1064.526 kb on + strand, within HP15_1043 at 1064.534 kb on - strand, within HP15_1043 at 1064.763 kb on + strand, within HP15_1043 at 1064.764 kb on - strand, within HP15_1043 at 1064.823 kb on + strand, within HP15_1043 at 1064.873 kb on + strand, within HP15_1043 at 1064.909 kb on + strand, within HP15_1043 at 1065.240 kb on + strand at 1065.240 kb on + strand at 1065.240 kb on + strand at 1065.240 kb on + strand at 1065.248 kb on - strand at 1065.248 kb on - strand at 1065.248 kb on - strand at 1065.309 kb on + strand, within HP15_1044 at 1065.405 kb on - strand, within HP15_1044 at 1065.408 kb on + strand, within HP15_1044 at 1065.627 kb on + strand, within HP15_1044 at 1065.637 kb on + strand, within HP15_1044 at 1065.674 kb on + strand, within HP15_1044 at 1065.690 kb on + strand, within HP15_1044 at 1065.723 kb on + strand, within HP15_1044 at 1065.724 kb on - strand, within HP15_1044 at 1065.749 kb on - strand, within HP15_1044 at 1065.846 kb on + strand at 1066.331 kb on + strand at 1066.372 kb on + strand at 1066.372 kb on + strand at 1066.391 kb on + strand at 1066.399 kb on - strand at 1066.427 kb on - strand at 1066.509 kb on - strand at 1066.516 kb on - strand at 1066.582 kb on - strand at 1066.599 kb on + strand at 1066.635 kb on - strand at 1066.641 kb on - strand at 1066.711 kb on + strand, within HP15_1047 at 1066.719 kb on - strand, within HP15_1047 at 1066.856 kb on + strand, within HP15_1047
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.125 vol% remove 1,064,315 - HP15_1043 0.21 -0.1 1,064,350 - HP15_1043 0.24 +0.1 1,064,352 + HP15_1043 0.24 -0.5 1,064,360 - HP15_1043 0.25 +0.2 1,064,386 + HP15_1043 0.27 -0.1 1,064,474 - HP15_1043 0.35 -0.0 1,064,526 + HP15_1043 0.40 +0.0 1,064,534 - HP15_1043 0.41 -0.1 1,064,763 + HP15_1043 0.62 -0.2 1,064,764 - HP15_1043 0.63 -0.9 1,064,823 + HP15_1043 0.68 -0.1 1,064,873 + HP15_1043 0.73 -0.1 1,064,909 + HP15_1043 0.76 -0.3 1,065,240 + +0.2 1,065,240 + +0.8 1,065,240 + +1.4 1,065,240 + -0.3 1,065,248 - +0.3 1,065,248 - +0.2 1,065,248 - +0.5 1,065,309 + HP15_1044 0.14 -0.2 1,065,405 - HP15_1044 0.29 +0.9 1,065,408 + HP15_1044 0.29 -0.8 1,065,627 + HP15_1044 0.64 -2.3 1,065,637 + HP15_1044 0.65 +0.1 1,065,674 + HP15_1044 0.71 -0.3 1,065,690 + HP15_1044 0.74 -0.6 1,065,723 + HP15_1044 0.79 -0.3 1,065,724 - HP15_1044 0.79 -1.0 1,065,749 - HP15_1044 0.83 +0.0 1,065,846 + +0.6 1,066,331 + -0.1 1,066,372 + +2.0 1,066,372 + -0.1 1,066,391 + -0.5 1,066,399 - -0.5 1,066,427 - +0.5 1,066,509 - -1.3 1,066,516 - -0.0 1,066,582 - +0.2 1,066,599 + +0.4 1,066,635 - -0.2 1,066,641 - -1.0 1,066,711 + HP15_1047 0.12 -0.0 1,066,719 - HP15_1047 0.12 +0.7 1,066,856 + HP15_1047 0.17 +1.0
Or see this region's nucleotide sequence