Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11050 and BWI76_RS11055 are separated by 12 nucleotides BWI76_RS11055 and BWI76_RS11060 are separated by 190 nucleotides BWI76_RS11060 and BWI76_RS11065 are separated by 141 nucleotides
BWI76_RS11050: BWI76_RS11050 - 23S rRNA pseudouridine(955/2504/2580) synthase, at 2,332,413 to 2,333,408
_RS11050
BWI76_RS11055: BWI76_RS11055 - hydrolase, at 2,333,421 to 2,334,566
_RS11055
BWI76_RS11060: BWI76_RS11060 - septum formation inhibitor Maf, at 2,334,757 to 2,335,341
_RS11060
BWI76_RS11065: BWI76_RS11065 - hypothetical protein, at 2,335,483 to 2,336,004
_RS11065
Position (kb)
2333
2334
2335 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2332.541 kb on + strand, within BWI76_RS11050 at 2332.547 kb on - strand, within BWI76_RS11050 at 2332.547 kb on - strand, within BWI76_RS11050 at 2332.549 kb on - strand, within BWI76_RS11050 at 2332.549 kb on - strand, within BWI76_RS11050 at 2332.585 kb on + strand, within BWI76_RS11050 at 2332.699 kb on + strand, within BWI76_RS11050 at 2332.806 kb on + strand, within BWI76_RS11050 at 2332.813 kb on + strand, within BWI76_RS11050 at 2332.821 kb on - strand, within BWI76_RS11050 at 2332.989 kb on - strand, within BWI76_RS11050 at 2333.186 kb on - strand, within BWI76_RS11050 at 2333.211 kb on - strand, within BWI76_RS11050 at 2333.570 kb on + strand, within BWI76_RS11055 at 2333.838 kb on + strand, within BWI76_RS11055 at 2334.197 kb on + strand, within BWI76_RS11055 at 2334.286 kb on - strand, within BWI76_RS11055 at 2334.373 kb on - strand, within BWI76_RS11055 at 2334.548 kb on - strand at 2334.685 kb on + strand at 2334.914 kb on - strand, within BWI76_RS11060 at 2335.003 kb on - strand at 2335.153 kb on + strand, within BWI76_RS11060
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM remove 2,332,541 + BWI76_RS11050 0.13 +0.1 2,332,547 - BWI76_RS11050 0.13 -0.9 2,332,547 - BWI76_RS11050 0.13 +0.2 2,332,549 - BWI76_RS11050 0.14 -0.8 2,332,549 - BWI76_RS11050 0.14 -0.8 2,332,585 + BWI76_RS11050 0.17 -0.6 2,332,699 + BWI76_RS11050 0.29 -0.0 2,332,806 + BWI76_RS11050 0.39 -0.4 2,332,813 + BWI76_RS11050 0.40 -2.8 2,332,821 - BWI76_RS11050 0.41 -1.2 2,332,989 - BWI76_RS11050 0.58 +0.0 2,333,186 - BWI76_RS11050 0.78 -0.9 2,333,211 - BWI76_RS11050 0.80 -0.4 2,333,570 + BWI76_RS11055 0.13 +0.1 2,333,838 + BWI76_RS11055 0.36 +1.0 2,334,197 + BWI76_RS11055 0.68 -0.2 2,334,286 - BWI76_RS11055 0.75 +1.1 2,334,373 - BWI76_RS11055 0.83 +0.6 2,334,548 - -0.5 2,334,685 + +0.4 2,334,914 - BWI76_RS11060 0.27 -0.3 2,335,003 - -0.8 2,335,153 + BWI76_RS11060 0.68 -0.4
Or see this region's nucleotide sequence