Experiment: MoLS4 minimal media with L-Serine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2719 and DvMF_2720 overlap by 4 nucleotides DvMF_2720 and DvMF_2721 are separated by 243 nucleotides DvMF_2721 and DvMF_2722 overlap by 11 nucleotides
DvMF_2719: DvMF_2719 - competence protein ComM, putative (RefSeq), at 3,443,316 to 3,444,026
_2719
DvMF_2720: DvMF_2720 - phosphatidylserine/phosphatidylglycerophosphate related protein (RefSeq), at 3,444,023 to 3,444,577
_2720
DvMF_2721: DvMF_2721 - hypothetical protein (RefSeq), at 3,444,821 to 3,445,171
_2721
DvMF_2722: DvMF_2722 - Radical SAM domain protein (RefSeq), at 3,445,161 to 3,446,624
_2722
Position (kb)
3444
3445 Strain fitness (log2 ratio)
-1
0
1 at 3443.033 kb on - strand at 3443.122 kb on - strand at 3443.172 kb on + strand at 3443.343 kb on - strand at 3443.350 kb on + strand at 3443.396 kb on + strand, within DvMF_2719 at 3443.396 kb on + strand, within DvMF_2719 at 3443.485 kb on + strand, within DvMF_2719 at 3443.684 kb on + strand, within DvMF_2719 at 3443.785 kb on - strand, within DvMF_2719 at 3443.882 kb on + strand, within DvMF_2719 at 3443.890 kb on - strand, within DvMF_2719 at 3444.095 kb on + strand, within DvMF_2720 at 3444.109 kb on - strand, within DvMF_2720 at 3444.116 kb on - strand, within DvMF_2720 at 3444.209 kb on + strand, within DvMF_2720 at 3444.209 kb on + strand, within DvMF_2720 at 3444.387 kb on + strand, within DvMF_2720 at 3444.388 kb on - strand, within DvMF_2720
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with L-Serine remove 3,443,033 - -0.3 3,443,122 - -0.9 3,443,172 + -0.6 3,443,343 - -0.5 3,443,350 + -0.4 3,443,396 + DvMF_2719 0.11 -0.8 3,443,396 + DvMF_2719 0.11 -0.6 3,443,485 + DvMF_2719 0.24 -1.5 3,443,684 + DvMF_2719 0.52 -0.5 3,443,785 - DvMF_2719 0.66 -0.6 3,443,882 + DvMF_2719 0.80 -0.7 3,443,890 - DvMF_2719 0.81 -0.9 3,444,095 + DvMF_2720 0.13 -1.0 3,444,109 - DvMF_2720 0.15 -0.5 3,444,116 - DvMF_2720 0.17 -0.5 3,444,209 + DvMF_2720 0.34 -0.7 3,444,209 + DvMF_2720 0.34 -0.6 3,444,387 + DvMF_2720 0.66 -0.1 3,444,388 - DvMF_2720 0.66 +0.7
Or see this region's nucleotide sequence