Experiment: MoLS4 minimal media with L-Serine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0749 and DvMF_0750 overlap by 4 nucleotides DvMF_0750 and DvMF_0751 are separated by 43 nucleotides DvMF_0751 and DvMF_0752 are separated by 8 nucleotides DvMF_0752 and DvMF_0753 are separated by 285 nucleotides
DvMF_0749: DvMF_0749 - Baseplate J family protein (RefSeq), at 896,164 to 897,225
_0749
DvMF_0750: DvMF_0750 - hypothetical protein (RefSeq), at 897,222 to 897,791
_0750
DvMF_0751: DvMF_0751 - hypothetical protein (RefSeq), at 897,835 to 899,127
_0751
DvMF_0752: DvMF_0752 - hypothetical protein (RefSeq), at 899,136 to 899,693
_0752
DvMF_0753: DvMF_0753 - hypothetical protein (RefSeq), at 899,979 to 900,185
_0753
Position (kb) 897
898
899
900 Strain fitness (log2 ratio) -1
0
1 at 896.968 kb on + strand, within DvMF_0749 at 896.998 kb on + strand, within DvMF_0749 at 897.076 kb on - strand, within DvMF_0749 at 897.245 kb on - strand at 897.479 kb on - strand, within DvMF_0750 at 897.532 kb on + strand, within DvMF_0750 at 897.542 kb on + strand, within DvMF_0750 at 897.545 kb on - strand, within DvMF_0750 at 897.647 kb on - strand, within DvMF_0750 at 897.832 kb on + strand at 897.840 kb on - strand at 897.933 kb on + strand at 897.985 kb on + strand, within DvMF_0751 at 897.990 kb on + strand, within DvMF_0751 at 898.047 kb on + strand, within DvMF_0751 at 898.240 kb on + strand, within DvMF_0751 at 898.270 kb on - strand, within DvMF_0751 at 898.321 kb on + strand, within DvMF_0751 at 898.376 kb on - strand, within DvMF_0751 at 898.376 kb on - strand, within DvMF_0751 at 898.446 kb on - strand, within DvMF_0751 at 898.477 kb on + strand, within DvMF_0751 at 898.604 kb on + strand, within DvMF_0751 at 898.653 kb on + strand, within DvMF_0751 at 898.656 kb on - strand, within DvMF_0751 at 898.727 kb on - strand, within DvMF_0751 at 898.828 kb on - strand, within DvMF_0751 at 898.847 kb on - strand, within DvMF_0751 at 898.862 kb on - strand, within DvMF_0751 at 899.146 kb on - strand at 899.158 kb on - strand at 899.211 kb on - strand, within DvMF_0752 at 899.219 kb on - strand, within DvMF_0752 at 899.248 kb on - strand, within DvMF_0752 at 899.930 kb on - strand at 899.931 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with L-Serine remove 896,968 + DvMF_0749 0.76 +0.4 896,998 + DvMF_0749 0.79 +0.0 897,076 - DvMF_0749 0.86 -0.3 897,245 - +0.4 897,479 - DvMF_0750 0.45 -0.6 897,532 + DvMF_0750 0.54 -0.7 897,542 + DvMF_0750 0.56 -1.3 897,545 - DvMF_0750 0.57 -0.7 897,647 - DvMF_0750 0.75 +0.2 897,832 + +0.4 897,840 - -0.4 897,933 + +0.3 897,985 + DvMF_0751 0.12 -0.4 897,990 + DvMF_0751 0.12 -0.3 898,047 + DvMF_0751 0.16 +0.6 898,240 + DvMF_0751 0.31 -0.5 898,270 - DvMF_0751 0.34 -0.5 898,321 + DvMF_0751 0.38 -1.6 898,376 - DvMF_0751 0.42 +1.1 898,376 - DvMF_0751 0.42 -0.3 898,446 - DvMF_0751 0.47 -1.6 898,477 + DvMF_0751 0.50 -0.4 898,604 + DvMF_0751 0.59 -0.7 898,653 + DvMF_0751 0.63 -0.7 898,656 - DvMF_0751 0.63 -1.0 898,727 - DvMF_0751 0.69 +0.4 898,828 - DvMF_0751 0.77 -1.0 898,847 - DvMF_0751 0.78 -0.0 898,862 - DvMF_0751 0.79 +0.4 899,146 - +1.6 899,158 - -0.4 899,211 - DvMF_0752 0.13 +0.2 899,219 - DvMF_0752 0.15 -0.3 899,248 - DvMF_0752 0.20 -0.2 899,930 - +0.7 899,931 - -0.4
Or see this region's nucleotide sequence