Experiment: MoLS4 minimal media with L-Serine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0405 and DvMF_0406 are separated by 141 nucleotides DvMF_0406 and DvMF_0407 overlap by 17 nucleotides DvMF_0407 and DvMF_0408 are separated by 5 nucleotides DvMF_0408 and DvMF_0409 are separated by 36 nucleotides
DvMF_0405: DvMF_0405 - hypothetical protein (RefSeq), at 475,875 to 476,840
_0405
DvMF_0406: DvMF_0406 - Tetratricopeptide TPR_4 (RefSeq), at 476,982 to 477,947
_0406
DvMF_0407: DvMF_0407 - Septum formation initiator (RefSeq), at 477,931 to 478,260
_0407
DvMF_0408: DvMF_0408 - hypothetical protein (RefSeq), at 478,266 to 478,538
_0408
DvMF_0409: DvMF_0409 - CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (RefSeq), at 478,575 to 479,162
_0409
Position (kb) 476
477
478 Strain fitness (log2 ratio) -1
0
1 at 476.013 kb on - strand, within DvMF_0405 at 476.171 kb on - strand, within DvMF_0405 at 476.394 kb on + strand, within DvMF_0405 at 476.671 kb on - strand, within DvMF_0405 at 476.759 kb on - strand at 476.844 kb on + strand at 476.988 kb on - strand at 477.550 kb on - strand, within DvMF_0406 at 477.568 kb on + strand, within DvMF_0406 at 477.576 kb on - strand, within DvMF_0406 at 478.398 kb on - strand, within DvMF_0408 at 478.512 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with L-Serine remove 476,013 - DvMF_0405 0.14 +0.2 476,171 - DvMF_0405 0.31 -1.2 476,394 + DvMF_0405 0.54 -0.5 476,671 - DvMF_0405 0.82 -0.0 476,759 - -1.3 476,844 + -0.4 476,988 - -0.2 477,550 - DvMF_0406 0.59 +0.4 477,568 + DvMF_0406 0.61 +1.4 477,576 - DvMF_0406 0.61 +0.2 478,398 - DvMF_0408 0.48 -0.8 478,512 + +0.1
Or see this region's nucleotide sequence