Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3386

Experiment: Formate/Acetate-Sulfate (60/1-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/1-30 mM)
3,558,467	+	zraP	DVU3384	0.20	-1.1
3,558,468	+	zraP	DVU3384	0.20	-0.0
3,558,486	-	zraP	DVU3384	0.24	-0.6
3,558,490	+	zraP	DVU3384	0.25	-0.6
3,558,493	-	zraP	DVU3384	0.25	-0.8
3,558,498	-	zraP	DVU3384	0.26	-0.1
3,558,498	-	zraP	DVU3384	0.26	+0.0
3,558,500	+	zraP	DVU3384	0.26	-0.3
3,558,524	+	zraP	DVU3384	0.31	+0.3
3,558,542	-	zraP	DVU3384	0.34	-0.2
3,558,553	+	zraP	DVU3384	0.37	+1.4
3,558,580	+	zraP	DVU3384	0.42	-0.7
3,558,580	+	zraP	DVU3384	0.42	-0.6
3,558,588	-	zraP	DVU3384	0.43	+0.1
3,558,611	+	zraP	DVU3384	0.48	+0.2
3,558,622	+	zraP	DVU3384	0.50	-0.0
3,558,630	-	zraP	DVU3384	0.51	-0.9
3,558,634	+	zraP	DVU3384	0.52	-1.0
3,558,642	-	zraP	DVU3384	0.54	-0.4
3,558,664	+	zraP	DVU3384	0.58	-0.9
3,558,685	+	zraP	DVU3384	0.62	+1.1
3,558,688	-	zraP	DVU3384	0.62	-0.0
3,558,764	-	zraP	DVU3384	0.77	-0.3
3,558,764	-	zraP	DVU3384	0.77	-1.0
3,558,857	+				-0.8
3,558,894	+				-0.1
3,558,894	+				-0.3
3,558,959	-				-0.7
3,558,965	+				-0.2
3,559,038	-				-0.4
3,559,052	+				-2.0
3,559,052	+				-0.6
3,559,052	-				-0.2
3,559,054	+				+0.2
3,559,060	-				-0.6
3,559,060	-				-0.3
3,559,060	-				-0.2
3,559,060	-				-0.1
3,559,088	-				+0.1
3,559,148	+				+0.0
3,559,150	-				-0.4
3,559,156	-				+0.3
3,559,156	-				-0.6
3,559,315	+				-0.2
3,559,321	+				-0.1
3,559,323	-				-0.4
3,559,330	+				-0.1
3,559,415	+				-0.6
3,559,463	+				+0.2
3,559,504	-				-0.2
3,559,557	+				+0.9
3,559,589	+		DVU3386	0.10	+0.4
3,559,589	+		DVU3386	0.10	+1.7
3,559,589	+		DVU3386	0.10	+0.1
3,559,589	+		DVU3386	0.10	+0.6
3,559,589	+		DVU3386	0.10	+0.1
3,559,597	-		DVU3386	0.11	-0.2
3,559,597	-		DVU3386	0.11	-1.1
3,559,597	-		DVU3386	0.11	-0.2
3,559,597	-		DVU3386	0.11	-0.4
3,559,597	-		DVU3386	0.11	+0.2
3,559,597	-		DVU3386	0.11	-0.2
3,559,597	-		DVU3386	0.11	-0.6
3,559,597	-		DVU3386	0.11	+0.1
3,559,610	+		DVU3386	0.12	-0.4
3,559,689	-		DVU3386	0.17	-0.5
3,559,879	+		DVU3386	0.31	-0.5
3,559,942	-		DVU3386	0.36	-0.0
3,559,951	+		DVU3386	0.36	-0.2
3,559,956	+		DVU3386	0.37	+0.5
3,560,072	+		DVU3386	0.45	-0.1
3,560,208	-		DVU3386	0.55	-0.9
3,560,218	-		DVU3386	0.56	+0.5
3,560,268	-		DVU3386	0.59	+0.1
3,560,277	-		DVU3386	0.60	+0.7
3,560,287	-		DVU3386	0.61	-0.9
3,560,299	-		DVU3386	0.62	-0.1
3,560,351	+		DVU3386	0.65	+0.1
3,560,359	-		DVU3386	0.66	+0.5
3,560,359	-		DVU3386	0.66	-0.5
3,560,359	-		DVU3386	0.66	+0.0
3,560,361	-		DVU3386	0.66	-0.1
3,560,409	+		DVU3386	0.69	+0.0
3,560,464	-		DVU3386	0.73	-0.3
3,560,471	-		DVU3386	0.74	+0.4
3,560,484	+		DVU3386	0.75	-0.5
3,560,504	-		DVU3386	0.76	+0.7
3,560,590	+		DVU3386	0.83	-0.5
3,560,637	+		DVU3386	0.86	+0.6
3,560,637	+		DVU3386	0.86	+0.4
3,560,639	+		DVU3386	0.86	+0.4
3,560,640	-		DVU3386	0.86	-0.4
3,560,645	-		DVU3386	0.87	-0.2
3,560,711	-				+0.2
3,560,737	+				+0.0
3,560,737	+				-2.0
3,560,737	+				+0.4
3,560,875	+				-0.0
3,560,879	+				-0.0
3,560,883	-				+0.5
3,560,893	+				-0.2
3,560,932	-				+1.2
3,561,020	+				-0.3
3,561,058	+				-1.2
3,561,066	-				-0.1
3,561,138	+				+0.3
3,561,146	-				-0.3
3,561,242	+				-0.2
3,561,250	-				-0.1
3,561,270	+				+1.0
3,561,311	-				+0.0
3,561,322	+				-0.5
3,561,322	+				+0.2
3,561,322	+				-0.5
3,561,322	+				-0.2
3,561,322	+				-0.6
3,561,322	+				+0.3
3,561,322	+				-1.1
3,561,322	+				-0.1
3,561,322	+				-0.1
3,561,322	+				+0.8
3,561,323	+				-0.5
3,561,323	+				-0.5
3,561,323	+				+0.4
3,561,324	+				+0.1
3,561,330	-				-0.2
3,561,330	-				-1.2
3,561,330	-				-2.5
3,561,330	-				-0.0
3,561,330	-				-0.2
3,561,330	-				+0.2
3,561,330	-				-0.6
3,561,330	-				+0.9
3,561,330	-				-0.5
3,561,331	-				+0.4
3,561,331	-				-0.6
3,561,331	-				+0.7
3,561,331	-				-0.1
3,561,331	-				-0.8
3,561,362	+				-0.8
3,561,390	-				-0.4
3,561,425	+				-0.5
3,561,500	+				-1.2
3,561,518	+				-0.8
3,561,518	+				+0.3
3,561,585	+				+1.5
3,561,617	-		DVU3387	0.11	+1.3
3,561,626	-		DVU3387	0.12	+1.2
3,561,682	+		DVU3387	0.18	+1.7
3,561,690	-		DVU3387	0.19	+1.1
3,561,719	+		DVU3387	0.21	-0.3
3,561,729	+		DVU3387	0.22	+0.9
3,561,732	-		DVU3387	0.23	-1.4
3,561,748	-		DVU3387	0.24	+1.9
3,561,759	+		DVU3387	0.25	+1.2
3,561,759	+		DVU3387	0.25	+3.3
3,561,764	+		DVU3387	0.26	+1.1
3,561,781	+		DVU3387	0.28	+1.2