Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3352

Experiment: Formate/Acetate-Sulfate (60/1-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/1-30 mM)
3,522,513	+	queA	DVU3351	0.22	+0.7
3,522,530	+	queA	DVU3351	0.23	-0.3
3,522,558	+	queA	DVU3351	0.26	-0.2
3,522,558	+	queA	DVU3351	0.26	-1.0
3,522,565	+	queA	DVU3351	0.26	+0.0
3,522,565	+	queA	DVU3351	0.26	-0.5
3,522,565	+	queA	DVU3351	0.26	+0.4
3,522,592	-	queA	DVU3351	0.29	-0.0
3,522,592	-	queA	DVU3351	0.29	+1.2
3,522,621	+	queA	DVU3351	0.31	-0.5
3,522,653	+	queA	DVU3351	0.34	-2.2
3,522,671	-	queA	DVU3351	0.36	+0.4
3,522,680	+	queA	DVU3351	0.37	-0.9
3,522,680	+	queA	DVU3351	0.37	-0.2
3,522,688	-	queA	DVU3351	0.37	+0.3
3,522,692	+	queA	DVU3351	0.38	+0.1
3,522,694	-	queA	DVU3351	0.38	-0.4
3,522,786	+	queA	DVU3351	0.46	+0.4
3,522,813	-	queA	DVU3351	0.49	+1.1
3,522,822	+	queA	DVU3351	0.49	+0.0
3,522,832	-	queA	DVU3351	0.50	-0.3
3,522,887	-	queA	DVU3351	0.55	-0.0
3,522,912	-	queA	DVU3351	0.58	-0.2
3,522,917	+	queA	DVU3351	0.58	+1.5
3,522,925	-	queA	DVU3351	0.59	+1.1
3,522,935	-	queA	DVU3351	0.60	-1.3
3,522,945	-	queA	DVU3351	0.60	-0.5
3,522,958	+	queA	DVU3351	0.62	-0.1
3,522,959	+	queA	DVU3351	0.62	-0.0
3,522,971	+	queA	DVU3351	0.63	-1.1
3,523,004	+	queA	DVU3351	0.66	-0.4
3,523,012	-	queA	DVU3351	0.66	+0.4
3,523,022	+	queA	DVU3351	0.67	+0.3
3,523,032	-	queA	DVU3351	0.68	-0.1
3,523,032	-	queA	DVU3351	0.68	-1.0
3,523,052	+	queA	DVU3351	0.70	+1.0
3,523,057	+	queA	DVU3351	0.71	-1.4
3,523,067	+	queA	DVU3351	0.71	-0.3
3,523,126	+	queA	DVU3351	0.77	+0.6
3,523,127	-	queA	DVU3351	0.77	-0.8
3,523,144	-	queA	DVU3351	0.78	+0.1
3,523,179	-	queA	DVU3351	0.81	+0.3
3,523,260	-	queA	DVU3351	0.89	-0.4
3,523,305	+				+0.4
3,523,338	-				-0.3
3,523,339	-				-0.1
3,523,346	-				-0.1
3,523,374	-				-0.0
3,523,428	-				-0.0
3,523,435	+				+0.7
3,523,444	+				-0.3
3,523,444	+				-0.5
3,523,444	+				+1.1
3,523,456	+				-0.3
3,523,488	+				-0.3
3,523,496	-				+0.6
3,523,535	+				-0.4
3,523,574	+		DVU3352	0.13	-0.6
3,523,635	+		DVU3352	0.24	-0.4
3,523,675	+		DVU3352	0.31	-0.4
3,523,827	+		DVU3352	0.58	-0.7
3,523,827	+		DVU3352	0.58	-0.9
3,523,901	+		DVU3352	0.71	-0.6
3,523,901	+		DVU3352	0.71	-1.5
3,523,959	+		DVU3352	0.81	-0.2
3,524,064	+				-1.3