Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3008

Experiment: Formate/Acetate-Sulfate (60/1-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/1-30 mM)
3,119,942	+		DVU3007	0.22	+0.3
3,119,956	-		DVU3007	0.23	+0.8
3,119,979	-		DVU3007	0.25	-0.0
3,119,984	-		DVU3007	0.26	+0.4
3,119,984	-		DVU3007	0.26	+0.5
3,119,988	+		DVU3007	0.26	+0.9
3,120,074	-		DVU3007	0.33	+0.2
3,120,140	+		DVU3007	0.38	+0.5
3,120,150	+		DVU3007	0.39	-0.4
3,120,192	+		DVU3007	0.43	+0.4
3,120,200	-		DVU3007	0.43	+0.1
3,120,247	-		DVU3007	0.47	+1.0
3,120,329	-		DVU3007	0.54	+0.6
3,120,470	+		DVU3007	0.65	+0.4
3,120,470	+		DVU3007	0.65	+0.6
3,120,470	+		DVU3007	0.65	+1.6
3,120,470	+		DVU3007	0.65	+0.9
3,120,478	-		DVU3007	0.66	+0.6
3,120,488	-		DVU3007	0.67	+1.1
3,120,543	-		DVU3007	0.71	+0.4
3,120,559	-		DVU3007	0.73	-1.1
3,120,566	-		DVU3007	0.73	+0.2
3,120,571	+		DVU3007	0.74	+1.6
3,120,596	-		DVU3007	0.76	+0.0
3,120,598	+		DVU3007	0.76	+0.7
3,120,653	+		DVU3007	0.80	+1.9
3,120,694	-		DVU3007	0.84	-0.4
3,120,752	+		DVU3007	0.88	+0.6
3,120,760	-		DVU3007	0.89	+0.1
3,120,803	-				+0.2
3,120,880	+				+1.5
3,121,076	-		DVU3008	0.17	+0.6
3,121,096	+		DVU3008	0.19	-1.0
3,121,127	-		DVU3008	0.22	+0.6
3,121,141	+		DVU3008	0.23	-0.1
3,121,176	+		DVU3008	0.27	+0.2
3,121,220	-		DVU3008	0.31	+0.4
3,121,265	-		DVU3008	0.35	+0.3
3,121,288	-		DVU3008	0.37	+0.8
3,121,292	+		DVU3008	0.37	+0.5
3,121,309	-		DVU3008	0.39	+0.3
3,121,413	-		DVU3008	0.49	+0.5
3,121,498	-		DVU3008	0.56	+0.8
3,121,526	-		DVU3008	0.59	+0.1
3,121,680	+		DVU3008	0.73	-0.1
3,121,782	+		DVU3008	0.83	+0.2
3,121,811	+		DVU3008	0.86	+0.7
3,121,837	-		DVU3008	0.88	+0.1
3,121,852	-		DVU3008	0.89	+0.1
3,121,856	+		DVU3008	0.90	-0.1
3,121,861	+				-0.2
3,121,869	-				-0.2
3,121,913	+				-0.0
3,121,926	-				-0.1
3,121,956	-				-0.0
3,122,002	-				+0.4
3,122,002	-				+1.4
3,122,002	-				+0.6
3,122,002	-				+0.7
3,122,012	-				+0.4
3,122,017	+				+0.7
3,122,240	-		DVU3009	0.28	+0.4
3,122,253	+		DVU3009	0.29	+0.9
3,122,321	-		DVU3009	0.36	+0.7
3,122,397	-		DVU3009	0.44	+0.4
3,122,419	+		DVU3009	0.46	+0.3
3,122,500	+		DVU3009	0.55	-0.0
3,122,518	-		DVU3009	0.56	+1.6
3,122,528	-		DVU3009	0.57	+0.5
3,122,528	-		DVU3009	0.57	+0.2
3,122,551	+		DVU3009	0.60	+0.7
3,122,551	+		DVU3009	0.60	+0.6
3,122,584	-		DVU3009	0.63	+0.5
3,122,595	+		DVU3009	0.64	-0.1
3,122,612	+		DVU3009	0.66	+0.4
3,122,612	+		DVU3009	0.66	+1.3
3,122,620	-		DVU3009	0.67	+0.5
3,122,661	+		DVU3009	0.71	+1.4
3,122,662	+		DVU3009	0.71	+0.0
3,122,714	+		DVU3009	0.76	+0.0
3,122,755	-		DVU3009	0.80	+0.3
3,122,771	-		DVU3009	0.82	-0.4
3,122,773	+		DVU3009	0.82	+0.2
3,122,775	+		DVU3009	0.83	+0.9
3,122,781	-		DVU3009	0.83	+0.5
3,122,783	-		DVU3009	0.83	-0.1
3,122,819	-		DVU3009	0.87	+0.1
3,122,831	+		DVU3009	0.88	+0.4
3,122,832	-		DVU3009	0.88	+0.5
3,122,878	-				+0.6