Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2993

Experiment: Formate/Acetate-Sulfate (60/1-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/1-30 mM)
3,100,568	+		DVU2992	0.41	+0.5
3,100,575	-		DVU2992	0.42	-0.0
3,100,576	-		DVU2992	0.42	+0.3
3,100,624	-		DVU2992	0.45	+0.4
3,100,624	-		DVU2992	0.45	+0.6
3,100,624	-		DVU2992	0.45	+0.2
3,100,624	-		DVU2992	0.45	+0.2
3,100,624	-		DVU2992	0.45	+0.6
3,100,655	-		DVU2992	0.47	+0.1
3,100,712	+		DVU2992	0.50	+1.5
3,100,720	-		DVU2992	0.51	+0.4
3,100,828	-		DVU2992	0.57	+0.1
3,100,964	+		DVU2992	0.66	+0.1
3,100,972	-		DVU2992	0.66	+0.9
3,100,973	+		DVU2992	0.66	+0.2
3,101,063	-		DVU2992	0.72	-0.5
3,101,146	-		DVU2992	0.77	+0.1
3,101,200	-		DVU2992	0.80	+1.1
3,101,246	+		DVU2992	0.83	+0.8
3,101,246	+		DVU2992	0.83	+0.1
3,101,246	+		DVU2992	0.83	+0.1
3,101,282	+		DVU2992	0.85	+0.2
3,101,302	-		DVU2992	0.87	-0.1
3,101,308	-		DVU2992	0.87	+0.5
3,101,325	+		DVU2992	0.88	+0.5
3,101,325	+		DVU2992	0.88	+0.1
3,101,333	-		DVU2992	0.89	+0.0
3,101,333	-		DVU2992	0.89	+0.3
3,101,335	+		DVU2992	0.89	+0.0
3,101,379	+				-0.5
3,101,379	+				+0.0
3,101,483	+				+0.1
3,101,485	+				-0.0
3,101,520	-				-0.2
3,101,525	-				-0.2
3,101,551	-				+0.4
3,101,582	+				-0.0
3,101,684	+				+0.1
3,101,691	-				+0.6
3,101,803	-				-0.2
3,101,858	+		DVU2993	0.12	+0.1
3,101,922	+		DVU2993	0.14	+0.5
3,101,994	+		DVU2993	0.17	-0.1
3,101,999	-		DVU2993	0.17	+0.8
3,102,066	+		DVU2993	0.20	-0.1
3,102,112	+		DVU2993	0.21	+0.6
3,102,112	+		DVU2993	0.21	-0.8
3,102,112	+		DVU2993	0.21	+0.2
3,102,121	-		DVU2993	0.22	+0.1
3,102,204	-		DVU2993	0.25	-1.0
3,102,204	-		DVU2993	0.25	-0.0
3,102,233	-		DVU2993	0.26	+0.5
3,102,274	+		DVU2993	0.28	-0.2
3,102,329	+		DVU2993	0.30	+0.1
3,102,349	+		DVU2993	0.30	+0.8
3,102,399	+		DVU2993	0.32	+0.4
3,102,444	+		DVU2993	0.34	+0.2
3,102,444	+		DVU2993	0.34	+1.2
3,102,449	+		DVU2993	0.34	+0.1
3,102,547	-		DVU2993	0.38	+0.2
3,102,635	+		DVU2993	0.41	+0.3
3,102,676	+		DVU2993	0.43	+0.6
3,102,748	-		DVU2993	0.45	+1.9
3,102,748	-		DVU2993	0.45	-0.1
3,102,749	+		DVU2993	0.45	+0.4
3,102,825	+		DVU2993	0.48	-0.3
3,102,851	+		DVU2993	0.49	+0.2
3,102,934	-		DVU2993	0.52	+0.1
3,102,982	+		DVU2993	0.54	+0.2
3,102,982	+		DVU2993	0.54	+0.1
3,103,029	+		DVU2993	0.56	+0.1
3,103,037	-		DVU2993	0.56	+0.2
3,103,037	-		DVU2993	0.56	-1.3
3,103,075	+		DVU2993	0.58	-0.3
3,103,075	+		DVU2993	0.58	+0.3
3,103,075	+		DVU2993	0.58	+0.2
3,103,075	+		DVU2993	0.58	+0.8
3,103,075	+		DVU2993	0.58	+0.5
3,103,078	-		DVU2993	0.58	-0.4
3,103,083	+		DVU2993	0.58	-0.2
3,103,083	-		DVU2993	0.58	-1.0
3,103,098	+		DVU2993	0.58	+0.1
3,103,106	-		DVU2993	0.59	-0.1
3,103,115	+		DVU2993	0.59	+0.3
3,103,123	-		DVU2993	0.59	+0.3
3,103,215	+		DVU2993	0.63	+1.7
3,103,215	+		DVU2993	0.63	+0.1
3,103,217	+		DVU2993	0.63	+0.4
3,103,278	+		DVU2993	0.65	+0.4
3,103,278	+		DVU2993	0.65	-0.4
3,103,278	+		DVU2993	0.65	-1.0
3,103,278	+		DVU2993	0.65	+0.2
3,103,278	+		DVU2993	0.65	+0.1
3,103,286	-		DVU2993	0.66	+0.2
3,103,286	-		DVU2993	0.66	+0.9
3,103,286	-		DVU2993	0.66	+1.3
3,103,286	-		DVU2993	0.66	-0.7
3,103,286	-		DVU2993	0.66	+0.1
3,103,286	-		DVU2993	0.66	+0.1
3,103,286	-		DVU2993	0.66	+0.4
3,103,286	-		DVU2993	0.66	+1.0
3,103,286	-		DVU2993	0.66	+0.3
3,103,359	+		DVU2993	0.68	-0.7
3,103,392	+		DVU2993	0.70	+0.2
3,103,415	-		DVU2993	0.70	+0.7
3,103,483	-		DVU2993	0.73	-1.0
3,103,567	-		DVU2993	0.76	+0.5
3,103,602	-		DVU2993	0.77	+0.0
3,103,602	-		DVU2993	0.77	+0.4
3,103,602	-		DVU2993	0.77	+0.3
3,103,641	+		DVU2993	0.79	+1.4
3,103,641	+		DVU2993	0.79	+0.2
3,103,646	+		DVU2993	0.79	+0.1
3,103,654	-		DVU2993	0.79	+0.2
3,104,009	+				+0.3
3,104,021	+				-0.1
3,104,047	+				+0.0
3,104,053	+				+0.5
3,104,055	-				-0.2
3,104,064	+				-1.6
3,104,115	-				-0.4
3,104,120	+				-0.4
3,104,123	-				+0.0
3,104,156	-				+0.7
3,104,250	+				+0.6
3,104,250	+				-0.3
3,104,258	-				+0.4
3,104,350	-		DVU2994	0.15	+0.1
3,104,376	-		DVU2994	0.17	+0.2
3,104,399	-		DVU2994	0.19	+0.2
3,104,453	+		DVU2994	0.25	-0.4
3,104,461	-		DVU2994	0.25	-0.2
3,104,487	+		DVU2994	0.28	+1.8
3,104,495	-		DVU2994	0.29	-0.1
3,104,563	+		DVU2994	0.35	+0.4
3,104,568	+		DVU2994	0.36	+0.7
3,104,748	-		DVU2994	0.53	+0.2
3,104,881	+		DVU2994	0.66	+0.2
3,104,896	+		DVU2994	0.68	+0.2
3,104,916	+		DVU2994	0.70	+1.4
3,104,934	+		DVU2994	0.71	-0.1
3,104,968	+		DVU2994	0.75	+0.5
3,105,033	+		DVU2994	0.81	+0.3
3,105,083	+		DVU2994	0.86	-0.0
3,105,089	-		DVU2994	0.86	+0.3
3,105,169	-				+0.6