Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33965

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,210,372	+		BPHYT_RS33960	0.33	-0.9
3,210,372	+		BPHYT_RS33960	0.33	+0.0
3,210,372	+		BPHYT_RS33960	0.33	-1.4
3,210,372	+		BPHYT_RS33960	0.33	+0.9
3,210,372	+		BPHYT_RS33960	0.33	+3.0
3,210,373	-		BPHYT_RS33960	0.33	-0.1
3,210,373	-		BPHYT_RS33960	0.33	-0.8
3,210,684	+		BPHYT_RS33960	0.63	-0.7
3,210,685	-		BPHYT_RS33960	0.64	+0.3
3,210,704	+		BPHYT_RS33960	0.65	-0.0
3,210,704	+		BPHYT_RS33960	0.65	-0.0
3,210,704	+		BPHYT_RS33960	0.65	-0.3
3,210,705	-		BPHYT_RS33960	0.65	-1.2
3,210,948	+		BPHYT_RS33960	0.89	+2.4
3,210,948	+		BPHYT_RS33960	0.89	-1.6
3,210,949	-		BPHYT_RS33960	0.89	+0.8
3,210,952	-		BPHYT_RS33960	0.90	-1.8
3,210,952	-		BPHYT_RS33960	0.90	-1.0
3,210,964	+				+0.1
3,210,980	+				+0.2
3,210,980	+				-1.1
3,211,059	+				+0.6
3,211,060	-				+0.2
3,211,060	-				+0.1
3,211,364	-		BPHYT_RS33965	0.12	-2.8
3,211,822	+		BPHYT_RS33965	0.51	+1.4
3,212,062	+		BPHYT_RS33965	0.71	+1.4
3,212,062	+		BPHYT_RS33965	0.71	-0.9
3,212,378	-				+0.6
3,212,475	+				-0.2
3,212,489	+				-0.1
3,212,489	+				-0.4
3,212,489	+				+0.7
3,213,009	+				-1.2
3,213,009	+				+1.0
3,213,009	+				-0.3
3,213,010	-				+1.2
3,213,013	+				-0.5
3,213,099	+				+1.0
3,213,099	+				-0.4
3,213,191	+		BPHYT_RS33975	0.11	-0.1
3,213,191	+		BPHYT_RS33975	0.11	-0.3
3,213,192	-		BPHYT_RS33975	0.11	+0.5