Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31970
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
2,731,494 | - | BPHYT_RS31965 | 0.29 | -1.5 | |
2,731,657 | - | BPHYT_RS31965 | 0.43 | +0.2 | |
2,731,760 | + | BPHYT_RS31965 | 0.52 | +3.3 | |
2,731,764 | - | BPHYT_RS31965 | 0.52 | -0.6 | |
2,731,764 | - | BPHYT_RS31965 | 0.52 | -0.2 | |
2,731,771 | - | BPHYT_RS31965 | 0.53 | -0.3 | |
2,731,777 | + | BPHYT_RS31965 | 0.54 | +0.5 | |
2,731,796 | - | BPHYT_RS31965 | 0.55 | -0.1 | |
2,731,945 | + | BPHYT_RS31965 | 0.68 | +0.7 | |
2,732,038 | + | BPHYT_RS31965 | 0.77 | -1.4 | |
2,732,075 | + | BPHYT_RS31965 | 0.80 | -0.1 | |
2,732,075 | + | BPHYT_RS31965 | 0.80 | -0.1 | |
2,732,104 | + | BPHYT_RS31965 | 0.82 | -0.2 | |
2,732,195 | + | -0.1 | |||
2,732,434 | - | BPHYT_RS31970 | 0.15 | -0.0 | |
2,732,537 | + | BPHYT_RS31970 | 0.42 | -2.1 | |
2,732,640 | + | BPHYT_RS31970 | 0.70 | +0.1 | |
2,732,679 | - | BPHYT_RS31970 | 0.81 | -2.8 | |
2,732,775 | + | +0.0 | |||
2,732,783 | - | -0.5 | |||
2,732,851 | + | -0.3 | |||
2,732,883 | + | -0.0 | |||
2,732,996 | - | +0.3 | |||
2,732,996 | - | -1.2 | |||
2,733,471 | + | BPHYT_RS31975 | 0.69 | +3.3 | |
2,733,707 | - | -0.3 |
Or see this region's nucleotide sequence