Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31695
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
2,665,691 | - | BPHYT_RS31690 | 0.68 | -0.7 | |
2,665,699 | + | BPHYT_RS31690 | 0.69 | +1.3 | |
2,665,870 | + | BPHYT_RS31690 | 0.84 | +1.3 | |
2,665,871 | - | BPHYT_RS31690 | 0.84 | +0.9 | |
2,666,089 | + | -1.7 | |||
2,666,186 | + | +0.4 | |||
2,666,317 | + | -1.0 | |||
2,666,846 | - | BPHYT_RS31695 | 0.37 | +0.8 | |
2,666,961 | + | BPHYT_RS31695 | 0.44 | -3.1 | |
2,666,964 | + | BPHYT_RS31695 | 0.44 | -0.5 | |
2,667,110 | + | BPHYT_RS31695 | 0.52 | -2.9 | |
2,667,412 | + | BPHYT_RS31695 | 0.69 | -0.5 | |
2,667,592 | - | BPHYT_RS31695 | 0.79 | -0.9 | |
2,667,643 | + | BPHYT_RS31695 | 0.82 | +0.1 | |
2,667,862 | + | -0.3 | |||
2,667,884 | - | +2.0 | |||
2,668,580 | + | +0.1 |
Or see this region's nucleotide sequence