Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29960

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
2,274,758	-		BPHYT_RS29955	0.18	+0.0
2,274,761	+		BPHYT_RS29955	0.18	+0.6
2,274,761	+		BPHYT_RS29955	0.18	+1.2
2,274,762	-		BPHYT_RS29955	0.18	-0.8
2,274,762	-		BPHYT_RS29955	0.18	+0.1
2,274,882	-		BPHYT_RS29955	0.31	-0.2
2,275,013	+		BPHYT_RS29955	0.46	+0.5
2,275,014	-		BPHYT_RS29955	0.46	+1.9
2,275,014	-		BPHYT_RS29955	0.46	-0.4
2,275,015	-		BPHYT_RS29955	0.46	-0.2
2,275,460	+				+2.2
2,275,461	-				-0.1
2,275,469	+				+1.3
2,275,533	-				+0.5
2,275,533	-				-0.8
2,275,533	-				+3.1
2,275,635	+				+0.4
2,275,635	+				-0.1
2,275,636	-				-0.7
2,275,636	-				-0.9
2,275,767	+				+0.5
2,275,768	-				+0.3
2,275,768	-				-0.3
2,276,052	+		BPHYT_RS29960	0.36	+0.5
2,276,118	-		BPHYT_RS29960	0.43	-0.4
2,276,118	-		BPHYT_RS29960	0.43	-0.2
2,276,598	-				-0.4
2,276,679	+				+1.3
2,276,680	-				-0.7
2,276,789	+				+0.2
2,276,840	-				+0.3
2,276,929	+				+0.4
2,277,003	+		BPHYT_RS29965	0.13	+0.7
2,277,003	+		BPHYT_RS29965	0.13	+1.9
2,277,003	+		BPHYT_RS29965	0.13	+1.3
2,277,028	-		BPHYT_RS29965	0.15	+0.9
2,277,608	-		BPHYT_RS29965	0.56	+2.2