Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28605
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
1,969,108 | - | BPHYT_RS28595 | 0.72 | -1.7 | |
1,969,127 | + | BPHYT_RS28595 | 0.76 | -0.7 | |
1,969,276 | + | -0.7 | |||
1,969,277 | - | -0.3 | |||
1,969,446 | - | BPHYT_RS28600 | 0.37 | -1.7 | |
1,969,755 | + | -0.4 | |||
1,970,023 | - | +0.2 | |||
1,970,154 | - | BPHYT_RS28605 | 0.16 | -0.2 | |
1,970,632 | - | BPHYT_RS28605 | 0.82 | -0.8 | |
1,971,157 | + | -0.7 | |||
1,971,277 | - | -0.7 | |||
1,971,616 | - | BPHYT_RS28610 | 0.22 | +0.6 | |
1,971,619 | + | BPHYT_RS28610 | 0.22 | -0.3 |
Or see this region's nucleotide sequence