Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28360
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
1,915,052 | - | -0.7 | |||
1,915,072 | - | -1.0 | |||
1,915,136 | + | +0.2 | |||
1,915,241 | - | +0.9 | |||
1,915,243 | + | +2.3 | |||
1,915,501 | + | BPHYT_RS28360 | 0.79 | +1.5 | |
1,915,502 | - | BPHYT_RS28360 | 0.79 | +3.3 | |
1,915,860 | + | BPHYT_RS28365 | 0.68 | -0.2 | |
1,915,969 | + | +2.3 | |||
1,915,970 | - | +2.1 | |||
1,916,191 | + | BPHYT_RS28370 | 0.20 | +0.5 |
Or see this region's nucleotide sequence