Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26955
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
1,624,428 | - | BPHYT_RS26950 | 0.33 | +0.1 | |
1,624,428 | - | BPHYT_RS26950 | 0.33 | +0.6 | |
1,624,541 | - | BPHYT_RS26950 | 0.41 | -0.9 | |
1,624,910 | + | BPHYT_RS26950 | 0.67 | -1.3 | |
1,624,911 | - | BPHYT_RS26950 | 0.67 | -0.6 | |
1,624,913 | - | BPHYT_RS26950 | 0.67 | +0.2 | |
1,625,813 | - | BPHYT_RS26955 | 0.39 | -1.0 | |
1,626,491 | - | +0.2 | |||
1,626,491 | - | +1.5 | |||
1,626,500 | - | +0.1 | |||
1,626,554 | + | -0.6 | |||
1,626,554 | + | -0.4 | |||
1,626,856 | + | BPHYT_RS26960 | 0.31 | +0.4 | |
1,627,279 | + | BPHYT_RS26960 | 0.78 | -0.9 |
Or see this region's nucleotide sequence