Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS23775 and BPHYT_RS23780 overlap by 4 nucleotides BPHYT_RS23780 and BPHYT_RS23785 are separated by 4 nucleotides
BPHYT_RS23775: BPHYT_RS23775 - phosphonoacetate hydrolase, at 900,484 to 901,773
_RS23775
BPHYT_RS23780: BPHYT_RS23780 - DeoR faimly transcriptional regulator, at 901,770 to 903,221
_RS23780
BPHYT_RS23785: BPHYT_RS23785 - phosphohydrolase, at 903,226 to 903,786
_RS23785
Position (kb) 901
902
903
904 Strain fitness (log2 ratio) -2
-1
0
1
2 at 901.039 kb on + strand, within BPHYT_RS23775 at 901.039 kb on + strand, within BPHYT_RS23775 at 901.039 kb on + strand, within BPHYT_RS23775 at 901.114 kb on + strand, within BPHYT_RS23775 at 901.114 kb on + strand, within BPHYT_RS23775 at 901.115 kb on - strand, within BPHYT_RS23775 at 901.115 kb on - strand, within BPHYT_RS23775 at 901.132 kb on + strand, within BPHYT_RS23775 at 901.181 kb on - strand, within BPHYT_RS23775 at 901.181 kb on - strand, within BPHYT_RS23775 at 901.300 kb on + strand, within BPHYT_RS23775 at 901.301 kb on - strand, within BPHYT_RS23775 at 901.373 kb on - strand, within BPHYT_RS23775 at 901.373 kb on - strand, within BPHYT_RS23775 at 901.373 kb on - strand, within BPHYT_RS23775 at 901.734 kb on + strand at 901.775 kb on + strand at 901.776 kb on - strand at 901.872 kb on + strand at 901.872 kb on + strand at 901.951 kb on - strand, within BPHYT_RS23780 at 902.367 kb on + strand, within BPHYT_RS23780 at 902.368 kb on - strand, within BPHYT_RS23780 at 902.368 kb on - strand, within BPHYT_RS23780 at 902.518 kb on - strand, within BPHYT_RS23780 at 902.616 kb on + strand, within BPHYT_RS23780 at 902.616 kb on + strand, within BPHYT_RS23780 at 902.617 kb on - strand, within BPHYT_RS23780 at 902.617 kb on - strand, within BPHYT_RS23780 at 902.618 kb on + strand, within BPHYT_RS23780 at 902.618 kb on + strand, within BPHYT_RS23780 at 902.696 kb on - strand, within BPHYT_RS23780 at 902.696 kb on - strand, within BPHYT_RS23780 at 902.865 kb on + strand, within BPHYT_RS23780 at 903.152 kb on + strand at 903.152 kb on + strand at 903.185 kb on + strand at 903.219 kb on + strand at 903.283 kb on + strand, within BPHYT_RS23785 at 903.457 kb on + strand, within BPHYT_RS23785 at 903.562 kb on + strand, within BPHYT_RS23785 at 903.621 kb on + strand, within BPHYT_RS23785 at 903.621 kb on + strand, within BPHYT_RS23785 at 903.622 kb on - strand, within BPHYT_RS23785 at 903.684 kb on + strand, within BPHYT_RS23785 at 903.685 kb on - strand, within BPHYT_RS23785 at 903.743 kb on + strand at 903.743 kb on + strand at 903.744 kb on - strand at 903.769 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 901,039 + BPHYT_RS23775 0.43 +0.3 901,039 + BPHYT_RS23775 0.43 +0.1 901,039 + BPHYT_RS23775 0.43 +0.3 901,114 + BPHYT_RS23775 0.49 +1.1 901,114 + BPHYT_RS23775 0.49 +1.0 901,115 - BPHYT_RS23775 0.49 +0.9 901,115 - BPHYT_RS23775 0.49 -1.3 901,132 + BPHYT_RS23775 0.50 -1.6 901,181 - BPHYT_RS23775 0.54 -0.2 901,181 - BPHYT_RS23775 0.54 -0.2 901,300 + BPHYT_RS23775 0.63 +0.3 901,301 - BPHYT_RS23775 0.63 -0.4 901,373 - BPHYT_RS23775 0.69 +0.5 901,373 - BPHYT_RS23775 0.69 +0.3 901,373 - BPHYT_RS23775 0.69 -0.2 901,734 + -0.2 901,775 + -1.1 901,776 - -1.1 901,872 + +0.3 901,872 + -0.8 901,951 - BPHYT_RS23780 0.12 -0.6 902,367 + BPHYT_RS23780 0.41 -1.3 902,368 - BPHYT_RS23780 0.41 +1.0 902,368 - BPHYT_RS23780 0.41 -0.6 902,518 - BPHYT_RS23780 0.52 -1.0 902,616 + BPHYT_RS23780 0.58 -0.1 902,616 + BPHYT_RS23780 0.58 -0.5 902,617 - BPHYT_RS23780 0.58 -0.3 902,617 - BPHYT_RS23780 0.58 -0.2 902,618 + BPHYT_RS23780 0.58 -0.6 902,618 + BPHYT_RS23780 0.58 +0.5 902,696 - BPHYT_RS23780 0.64 -0.8 902,696 - BPHYT_RS23780 0.64 -0.5 902,865 + BPHYT_RS23780 0.75 -1.0 903,152 + -0.6 903,152 + -2.1 903,185 + +1.0 903,219 + -0.1 903,283 + BPHYT_RS23785 0.10 +0.7 903,457 + BPHYT_RS23785 0.41 -0.2 903,562 + BPHYT_RS23785 0.60 +0.0 903,621 + BPHYT_RS23785 0.70 +2.6 903,621 + BPHYT_RS23785 0.70 +0.1 903,622 - BPHYT_RS23785 0.71 +2.7 903,684 + BPHYT_RS23785 0.82 +0.2 903,685 - BPHYT_RS23785 0.82 -1.5 903,743 + -0.7 903,743 + +0.4 903,744 - +0.3 903,769 - -1.4
Or see this region's nucleotide sequence