Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS22510
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
607,787 | - | BPHYT_RS22505 | 0.15 | +0.2 | |
607,884 | - | BPHYT_RS22505 | 0.27 | -0.4 | |
608,255 | - | BPHYT_RS22505 | 0.69 | -0.4 | |
608,361 | - | +1.3 | |||
608,517 | - | +1.2 | |||
608,517 | - | +1.3 | |||
608,558 | + | +0.5 | |||
609,211 | - | BPHYT_RS22510 | 0.52 | -1.0 | |
609,240 | + | BPHYT_RS22510 | 0.54 | -1.2 | |
609,241 | - | BPHYT_RS22510 | 0.54 | +0.3 | |
609,430 | - | BPHYT_RS22510 | 0.69 | -1.4 | |
609,430 | - | BPHYT_RS22510 | 0.69 | -0.0 | |
609,644 | - | BPHYT_RS22510 | 0.86 | -1.3 | |
609,962 | - | -0.1 | |||
610,346 | + | BPHYT_RS22515 | 0.15 | +0.2 | |
610,346 | + | BPHYT_RS22515 | 0.15 | +0.0 | |
610,358 | + | BPHYT_RS22515 | 0.15 | +0.6 | |
610,359 | - | BPHYT_RS22515 | 0.15 | +2.6 |
Or see this region's nucleotide sequence