Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17880

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
4,036,308	+		BPHYT_RS17865	0.81	-0.5
4,036,416	+				+0.2
4,036,471	+		BPHYT_RS17870	0.12	+0.4
4,036,471	+		BPHYT_RS17870	0.12	-0.8
4,036,471	+		BPHYT_RS17870	0.12	-0.7
4,036,471	+		BPHYT_RS17870	0.12	-1.2
4,036,472	-		BPHYT_RS17870	0.12	+0.1
4,036,472	-		BPHYT_RS17870	0.12	-0.7
4,036,477	-		BPHYT_RS17870	0.14	+1.4
4,036,637	+		BPHYT_RS17870	0.73	-0.1
4,036,637	+		BPHYT_RS17870	0.73	-0.2
4,036,737	-				-1.2
4,036,810	-				+0.1
4,036,863	+		BPHYT_RS17875	0.19	+0.4
4,036,897	-		BPHYT_RS17875	0.28	-0.9
4,036,919	+		BPHYT_RS17875	0.33	-0.3
4,036,920	-		BPHYT_RS17875	0.34	-0.9
4,036,992	+		BPHYT_RS17875	0.52	+0.8
4,036,993	-		BPHYT_RS17875	0.53	+2.6
4,037,083	+		BPHYT_RS17875	0.76	+0.0
4,037,083	+		BPHYT_RS17875	0.76	-0.7
4,037,084	-		BPHYT_RS17875	0.77	-0.1
4,037,193	-				-0.5
4,037,241	-				-0.3
4,037,242	+				-1.2
4,037,243	-				+0.3
4,037,243	-				-0.2
4,037,329	+				+1.0
4,037,493	-		BPHYT_RS17880	0.16	-0.5
4,037,493	-		BPHYT_RS17880	0.16	-1.4
4,037,675	+		BPHYT_RS17880	0.31	-0.2
4,037,675	+		BPHYT_RS17880	0.31	+0.7
4,037,675	+		BPHYT_RS17880	0.31	-0.3
4,037,676	-		BPHYT_RS17880	0.31	+0.9
4,037,753	-		BPHYT_RS17880	0.38	+1.1
4,037,839	+		BPHYT_RS17880	0.45	+0.3
4,037,839	+		BPHYT_RS17880	0.45	+1.1
4,037,839	+		BPHYT_RS17880	0.45	+0.2
4,037,840	-		BPHYT_RS17880	0.45	+0.9
4,037,840	-		BPHYT_RS17880	0.45	+0.3
4,037,840	-		BPHYT_RS17880	0.45	+0.8
4,038,007	+		BPHYT_RS17880	0.59	+1.1
4,038,007	+		BPHYT_RS17880	0.59	-0.4
4,038,119	+		BPHYT_RS17880	0.68	+0.5
4,038,119	+		BPHYT_RS17880	0.68	-1.9
4,038,120	-		BPHYT_RS17880	0.68	-2.1
4,038,120	-		BPHYT_RS17880	0.68	+0.3
4,038,477	+				+0.8
4,038,478	-				-0.8
4,038,711	+		BPHYT_RS17885	0.13	-0.1
4,038,712	-		BPHYT_RS17885	0.13	-2.1
4,038,813	-		BPHYT_RS17885	0.22	+2.5
4,039,179	+		BPHYT_RS17885	0.56	-0.7
4,039,299	+		BPHYT_RS17885	0.67	-3.6
4,039,300	-		BPHYT_RS17885	0.67	-3.0
4,039,428	+		BPHYT_RS17885	0.79	-2.5
4,039,429	-		BPHYT_RS17885	0.79	-0.4
4,039,429	-		BPHYT_RS17885	0.79	-0.8