Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16920

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,836,072	-		BPHYT_RS16915	0.14	-0.7
3,836,076	+		BPHYT_RS16915	0.14	-0.2
3,836,076	+		BPHYT_RS16915	0.14	+4.8
3,836,077	-		BPHYT_RS16915	0.15	+0.9
3,836,077	-		BPHYT_RS16915	0.15	-0.2
3,836,346	+		BPHYT_RS16915	0.44	+1.1
3,836,347	-		BPHYT_RS16915	0.44	+0.2
3,836,350	-		BPHYT_RS16915	0.45	-0.2
3,836,350	-		BPHYT_RS16915	0.45	-1.3
3,836,350	-		BPHYT_RS16915	0.45	+0.9
3,836,350	-		BPHYT_RS16915	0.45	-0.0
3,836,695	+		BPHYT_RS16915	0.83	-0.1
3,836,695	+		BPHYT_RS16915	0.83	-0.2
3,836,695	+		BPHYT_RS16915	0.83	-0.3
3,836,696	-		BPHYT_RS16915	0.83	-0.1
3,836,696	-		BPHYT_RS16915	0.83	-0.1
3,837,048	+		BPHYT_RS16920	0.25	+2.4
3,837,049	-		BPHYT_RS16920	0.25	+0.5
3,837,049	-		BPHYT_RS16920	0.25	+3.2
3,837,128	+		BPHYT_RS16920	0.35	-0.3
3,837,129	-		BPHYT_RS16920	0.35	-0.7
3,837,129	-		BPHYT_RS16920	0.35	+0.9
3,837,129	-		BPHYT_RS16920	0.35	+0.6
3,837,207	+		BPHYT_RS16920	0.45	+0.2
3,837,249	+		BPHYT_RS16920	0.50	+0.1
3,837,250	-		BPHYT_RS16920	0.51	+1.7
3,837,259	+		BPHYT_RS16920	0.52	+0.4
3,837,259	+		BPHYT_RS16920	0.52	+0.0
3,837,259	+		BPHYT_RS16920	0.52	+0.3
3,837,260	-		BPHYT_RS16920	0.52	-3.1
3,837,759	-				+0.5
3,837,765	-				+0.0
3,837,765	-				-0.7
3,837,765	-				-0.0
3,837,942	+		BPHYT_RS16925	0.25	-0.4
3,837,943	-		BPHYT_RS16925	0.25	+0.4
3,837,943	-		BPHYT_RS16925	0.25	+0.4
3,838,071	+		BPHYT_RS16925	0.38	+2.8
3,838,071	+		BPHYT_RS16925	0.38	-0.5
3,838,071	+		BPHYT_RS16925	0.38	+0.5
3,838,083	-		BPHYT_RS16925	0.39	+0.5
3,838,183	-		BPHYT_RS16925	0.49	+3.2
3,838,293	-		BPHYT_RS16925	0.60	-0.7
3,838,369	-		BPHYT_RS16925	0.67	-0.2
3,838,369	-		BPHYT_RS16925	0.67	-0.7