Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14110

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,220,774	+		BPHYT_RS14105	0.59	-1.3
3,220,812	-		BPHYT_RS14105	0.61	-0.8
3,220,831	+		BPHYT_RS14105	0.62	-1.6
3,220,831	+		BPHYT_RS14105	0.62	-2.2
3,220,831	+		BPHYT_RS14105	0.62	-1.8
3,220,832	-		BPHYT_RS14105	0.62	-0.0
3,220,832	-		BPHYT_RS14105	0.62	-0.6
3,220,832	-		BPHYT_RS14105	0.62	-0.4
3,220,859	-		BPHYT_RS14105	0.64	-1.0
3,220,859	-		BPHYT_RS14105	0.64	-1.7
3,220,954	+		BPHYT_RS14105	0.70	-0.7
3,220,954	+		BPHYT_RS14105	0.70	-0.8
3,220,955	-		BPHYT_RS14105	0.70	+1.0
3,221,060	+		BPHYT_RS14105	0.76	-2.1
3,221,061	-		BPHYT_RS14105	0.76	-2.2
3,221,061	-		BPHYT_RS14105	0.76	-2.0
3,221,224	+		BPHYT_RS14105	0.86	-1.6
3,221,224	+		BPHYT_RS14105	0.86	-3.1
3,221,224	+		BPHYT_RS14105	0.86	-2.0
3,221,225	-		BPHYT_RS14105	0.86	-1.6
3,221,225	-		BPHYT_RS14105	0.86	-1.2
3,221,318	+				-1.4
3,221,318	+				-2.8
3,221,318	+				-2.5
3,221,319	-				-0.2
3,221,319	-				-0.3
3,221,453	+				-0.1
3,221,453	+				-0.0
3,221,454	-				+0.3
3,221,526	-				-2.5
3,221,577	-				+0.4
3,221,577	-				+0.1
3,221,590	+				-0.7
3,221,591	-				+2.2
3,221,591	-				+0.7
3,221,591	-				-0.3
3,221,591	-				+0.7
3,221,670	+				+1.8
3,221,885	+		BPHYT_RS14110	0.11	+0.5
3,221,886	-		BPHYT_RS14110	0.11	-2.3
3,221,931	-				+2.9
3,222,035	+		BPHYT_RS14110	0.19	-0.1
3,222,036	-		BPHYT_RS14110	0.19	-0.2
3,222,306	+		BPHYT_RS14110	0.32	+0.4
3,222,306	+		BPHYT_RS14110	0.32	+1.1
3,222,519	-		BPHYT_RS14110	0.42	+0.1
3,222,519	-		BPHYT_RS14110	0.42	-0.3
3,222,519	-		BPHYT_RS14110	0.42	+0.1
3,222,519	-		BPHYT_RS14110	0.42	-0.5
3,222,521	+		BPHYT_RS14110	0.42	-0.1
3,222,521	+		BPHYT_RS14110	0.42	-0.3
3,222,689	+		BPHYT_RS14110	0.50	+0.1
3,222,770	+		BPHYT_RS14110	0.54	+0.8
3,222,771	-		BPHYT_RS14110	0.54	-3.2
3,222,771	-		BPHYT_RS14110	0.54	-1.3
3,222,930	-		BPHYT_RS14110	0.62	+0.1
3,223,040	+		BPHYT_RS14110	0.67	-0.1
3,223,040	+		BPHYT_RS14110	0.67	-1.5
3,223,040	+		BPHYT_RS14110	0.67	+0.5
3,223,040	+		BPHYT_RS14110	0.67	+0.6
3,223,041	-		BPHYT_RS14110	0.67	+0.4
3,223,122	+		BPHYT_RS14110	0.71	+0.6
3,223,122	+		BPHYT_RS14110	0.71	+2.2
3,223,123	-		BPHYT_RS14110	0.71	-0.4
3,223,311	-		BPHYT_RS14110	0.80	+0.8
3,223,311	-		BPHYT_RS14110	0.80	-0.5
3,223,457	+				+3.1
3,223,482	-		BPHYT_RS14110	0.89	+0.3
3,223,713	-				-0.8
3,223,795	+				-0.1
3,223,849	-				+1.3
3,223,999	-		BPHYT_RS14115	0.14	-0.4
3,224,124	+		BPHYT_RS14115	0.24	-0.3
3,224,474	-		BPHYT_RS14115	0.50	+0.3