Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13145
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
3,001,869 | + | BPHYT_RS13140 | 0.51 | -0.9 | |
3,001,967 | + | BPHYT_RS13140 | 0.59 | -2.3 | |
3,001,968 | - | BPHYT_RS13140 | 0.59 | -0.3 | |
3,002,304 | + | BPHYT_RS13140 | 0.87 | -2.3 | |
3,002,305 | - | BPHYT_RS13140 | 0.87 | -1.4 | |
3,002,317 | - | BPHYT_RS13140 | 0.88 | -0.3 | |
3,002,926 | - | -0.4 | |||
3,002,971 | + | -0.5 | |||
3,003,025 | + | BPHYT_RS13150 | 0.13 | -0.2 | |
3,003,556 | - | +0.0 | |||
3,003,626 | + | -0.1 | |||
3,003,627 | - | +2.3 | |||
3,003,627 | - | +1.8 | |||
3,003,627 | - | +1.4 | |||
3,003,821 | + | +3.3 | |||
3,003,822 | - | +0.6 | |||
3,003,865 | + | +0.1 | |||
3,003,866 | - | +0.1 | |||
3,003,866 | - | +1.7 |
Or see this region's nucleotide sequence