Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09760
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
2,213,106 | + | BPHYT_RS09755 | 0.25 | -0.1 | |
2,214,036 | + | -0.9 | |||
2,214,064 | + | -2.2 | |||
2,214,065 | - | +0.3 | |||
2,214,647 | + | BPHYT_RS09760 | 0.52 | +0.2 | |
2,214,773 | + | BPHYT_RS09760 | 0.64 | -1.6 | |
2,215,149 | + | +1.3 | |||
2,215,149 | + | +0.1 | |||
2,215,483 | - | BPHYT_RS09765 | 0.40 | -1.3 | |
2,215,549 | + | BPHYT_RS09765 | 0.49 | +1.2 | |
2,215,550 | - | BPHYT_RS09765 | 0.49 | +0.9 | |
2,215,732 | + | BPHYT_RS09765 | 0.74 | -0.1 | |
2,216,064 | + | BPHYT_RS09770 | 0.13 | -1.0 | |
2,216,134 | - | BPHYT_RS09770 | 0.19 | +0.5 |
Or see this region's nucleotide sequence