Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07515
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
|---|---|---|---|---|---|
| remove | |||||
| 1,708,883 | - | BPHYT_RS07510 | 0.27 | -2.5 | |
| 1,709,681 | + | -1.9 | |||
| 1,709,682 | - | +0.5 | |||
| 1,710,059 | + | BPHYT_RS07515 | 0.27 | -1.1 | |
| 1,710,096 | - | BPHYT_RS07515 | 0.31 | +0.0 | |
| 1,710,096 | - | BPHYT_RS07515 | 0.31 | -2.6 | |
| 1,710,972 | + | -1.6 | |||
| 1,710,973 | - | -0.8 | |||
| 1,710,973 | - | -1.8 | |||
| 1,710,973 | - | -1.1 | |||
| 1,710,976 | + | -1.6 | |||
| 1,710,977 | - | -0.3 | |||
| 1,710,977 | - | -0.8 | |||
| 1,710,977 | - | -0.8 | |||
| 1,710,977 | - | -0.2 | |||
| 1,710,990 | + | -0.5 | |||
| 1,711,041 | + | -0.6 | |||
| 1,711,042 | - | -0.6 | |||
| 1,711,087 | + | +0.4 | |||
| 1,711,087 | + | -0.7 | |||
| 1,711,088 | - | -2.1 | |||
| 1,711,088 | - | -0.8 | |||
| 1,711,135 | + | -1.8 | |||
| 1,711,368 | - | BPHYT_RS07520 | 0.11 | -0.2 |
Or see this region's nucleotide sequence