Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07365

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
1,670,570	-		BPHYT_RS07360	0.71	+0.6
1,670,613	+		BPHYT_RS07360	0.72	+0.7
1,670,699	-		BPHYT_RS07360	0.75	+0.6
1,670,797	+		BPHYT_RS07360	0.79	-0.3
1,670,800	+				+2.3
1,670,801	-		BPHYT_RS07360	0.79	-0.9
1,670,809	+		BPHYT_RS07360	0.79	+0.3
1,670,809	+		BPHYT_RS07360	0.79	-0.4
1,670,809	+		BPHYT_RS07360	0.79	+1.9
1,670,810	-		BPHYT_RS07360	0.79	-0.5
1,670,810	-		BPHYT_RS07360	0.79	+0.3
1,670,890	+		BPHYT_RS07360	0.82	+1.3
1,670,902	+		BPHYT_RS07360	0.83	-0.4
1,670,903	-		BPHYT_RS07360	0.83	+0.4
1,670,903	-		BPHYT_RS07360	0.83	+2.9
1,671,085	+		BPHYT_RS07360	0.89	+1.4
1,671,085	+		BPHYT_RS07360	0.89	-0.0
1,671,085	+		BPHYT_RS07360	0.89	+0.3
1,671,086	-		BPHYT_RS07360	0.89	-0.9
1,671,094	-		BPHYT_RS07360	0.89	+0.2
1,671,149	-				-0.3
1,671,358	+				+0.4
1,671,596	+				-0.3
1,671,596	+				-0.4
1,671,597	-				-0.6
1,671,597	-				+0.9
1,671,597	-				+0.4
1,671,951	-		BPHYT_RS07365	0.14	+0.9
1,671,951	-		BPHYT_RS07365	0.14	+0.8
1,671,951	-		BPHYT_RS07365	0.14	+0.7
1,671,951	-		BPHYT_RS07365	0.14	-2.0
1,672,305	-		BPHYT_RS07365	0.23	-0.1
1,672,311	-		BPHYT_RS07365	0.23	+0.6
1,672,311	-		BPHYT_RS07365	0.23	-0.5
1,672,312	+		BPHYT_RS07365	0.23	-0.9
1,672,312	+		BPHYT_RS07365	0.23	-1.3
1,672,358	-		BPHYT_RS07365	0.25	+0.5
1,672,514	+		BPHYT_RS07365	0.28	-0.8
1,673,004	-		BPHYT_RS07365	0.41	+0.5
1,673,045	+		BPHYT_RS07365	0.42	+0.2
1,673,228	+		BPHYT_RS07365	0.46	+0.5
1,673,234	+		BPHYT_RS07365	0.47	+1.3
1,673,325	-		BPHYT_RS07365	0.49	-2.4
1,673,328	-		BPHYT_RS07365	0.49	-0.0
1,673,438	+		BPHYT_RS07365	0.52	-0.5
1,673,439	-		BPHYT_RS07365	0.52	-1.5
1,673,441	+		BPHYT_RS07365	0.52	-1.2
1,673,441	+		BPHYT_RS07365	0.52	+0.0
1,673,682	-		BPHYT_RS07365	0.58	-0.9
1,674,539	+		BPHYT_RS07365	0.79	-0.0
1,674,708	-		BPHYT_RS07365	0.84	+1.1
1,674,708	-		BPHYT_RS07365	0.84	-1.0
1,674,708	-		BPHYT_RS07365	0.84	+1.3
1,674,869	+		BPHYT_RS07365	0.88	+0.0
1,674,903	-		BPHYT_RS07365	0.88	+0.0
1,674,905	-		BPHYT_RS07365	0.88	+0.3
1,674,977	+				-0.5
1,675,378	-				-0.0
1,675,382	-				-0.1
1,675,554	+		BPHYT_RS07370	0.28	+0.3
1,675,554	+		BPHYT_RS07370	0.28	-0.5
1,675,555	-		BPHYT_RS07370	0.28	+0.2
1,675,555	-		BPHYT_RS07370	0.28	-1.9
1,675,737	+		BPHYT_RS07370	0.61	-1.6
1,675,737	+		BPHYT_RS07370	0.61	-0.5
1,675,770	+		BPHYT_RS07370	0.67	-0.3
1,675,962	+				+1.7
1,675,962	+				-1.3
1,675,963	-				+0.6
1,675,963	-				+0.0