Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02990 and BPHYT_RS02995 are separated by 5 nucleotides BPHYT_RS02995 and BPHYT_RS03000 are separated by 10 nucleotides
BPHYT_RS02990: BPHYT_RS02990 - MFS transporter, at 665,790 to 667,175
_RS02990
BPHYT_RS02995: BPHYT_RS02995 - 2-methylcitrate dehydratase, at 667,181 to 668,593
_RS02995
BPHYT_RS03000: BPHYT_RS03000 - acyl-CoA dehydrogenase, at 668,604 to 669,767
_RS03000
Position (kb) 667
668
669 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 666.322 kb on - strand, within BPHYT_RS02990 at 666.323 kb on + strand, within BPHYT_RS02990 at 666.324 kb on - strand, within BPHYT_RS02990 at 666.324 kb on - strand, within BPHYT_RS02990 at 666.378 kb on - strand, within BPHYT_RS02990 at 666.599 kb on + strand, within BPHYT_RS02990 at 666.599 kb on + strand, within BPHYT_RS02990 at 666.600 kb on - strand, within BPHYT_RS02990 at 666.804 kb on + strand, within BPHYT_RS02990 at 666.868 kb on - strand, within BPHYT_RS02990 at 666.897 kb on + strand, within BPHYT_RS02990 at 666.898 kb on - strand, within BPHYT_RS02990 at 666.955 kb on + strand, within BPHYT_RS02990 at 666.955 kb on + strand, within BPHYT_RS02990 at 668.210 kb on + strand, within BPHYT_RS02995 at 668.211 kb on - strand, within BPHYT_RS02995 at 668.211 kb on - strand, within BPHYT_RS02995 at 668.352 kb on - strand, within BPHYT_RS02995 at 668.468 kb on + strand at 668.526 kb on + strand at 668.527 kb on - strand at 668.591 kb on + strand at 668.592 kb on - strand at 668.717 kb on + strand at 668.817 kb on + strand, within BPHYT_RS03000 at 668.817 kb on + strand, within BPHYT_RS03000 at 668.933 kb on + strand, within BPHYT_RS03000 at 668.934 kb on - strand, within BPHYT_RS03000 at 668.937 kb on + strand, within BPHYT_RS03000 at 668.938 kb on - strand, within BPHYT_RS03000 at 669.052 kb on - strand, within BPHYT_RS03000 at 669.224 kb on + strand, within BPHYT_RS03000 at 669.225 kb on - strand, within BPHYT_RS03000 at 669.319 kb on + strand, within BPHYT_RS03000 at 669.406 kb on - strand, within BPHYT_RS03000 at 669.406 kb on - strand, within BPHYT_RS03000 at 669.406 kb on - strand, within BPHYT_RS03000 at 669.532 kb on - strand, within BPHYT_RS03000 at 669.532 kb on - strand, within BPHYT_RS03000
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 666,322 - BPHYT_RS02990 0.38 +1.8 666,323 + BPHYT_RS02990 0.38 -0.8 666,324 - BPHYT_RS02990 0.39 +1.7 666,324 - BPHYT_RS02990 0.39 +0.5 666,378 - BPHYT_RS02990 0.42 -1.1 666,599 + BPHYT_RS02990 0.58 +1.5 666,599 + BPHYT_RS02990 0.58 -0.3 666,600 - BPHYT_RS02990 0.58 +0.1 666,804 + BPHYT_RS02990 0.73 -0.8 666,868 - BPHYT_RS02990 0.78 -0.1 666,897 + BPHYT_RS02990 0.80 +2.2 666,898 - BPHYT_RS02990 0.80 +0.3 666,955 + BPHYT_RS02990 0.84 +1.6 666,955 + BPHYT_RS02990 0.84 -0.0 668,210 + BPHYT_RS02995 0.73 -0.6 668,211 - BPHYT_RS02995 0.73 +0.4 668,211 - BPHYT_RS02995 0.73 +0.1 668,352 - BPHYT_RS02995 0.83 +0.2 668,468 + +1.2 668,526 + +1.3 668,527 - -1.8 668,591 + -0.1 668,592 - +0.1 668,717 + -0.4 668,817 + BPHYT_RS03000 0.18 +0.0 668,817 + BPHYT_RS03000 0.18 -0.7 668,933 + BPHYT_RS03000 0.28 -1.3 668,934 - BPHYT_RS03000 0.28 +1.0 668,937 + BPHYT_RS03000 0.29 -1.2 668,938 - BPHYT_RS03000 0.29 +0.6 669,052 - BPHYT_RS03000 0.38 -0.6 669,224 + BPHYT_RS03000 0.53 -1.2 669,225 - BPHYT_RS03000 0.53 +0.7 669,319 + BPHYT_RS03000 0.61 +0.6 669,406 - BPHYT_RS03000 0.69 -0.8 669,406 - BPHYT_RS03000 0.69 -0.3 669,406 - BPHYT_RS03000 0.69 -0.6 669,532 - BPHYT_RS03000 0.80 +3.5 669,532 - BPHYT_RS03000 0.80 +0.3
Or see this region's nucleotide sequence