Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS01720 and BPHYT_RS01725 are separated by 427 nucleotides BPHYT_RS01725 and BPHYT_RS01730 are separated by 115 nucleotides BPHYT_RS01730 and BPHYT_RS01735 are separated by 27 nucleotides
BPHYT_RS01720: BPHYT_RS01720 - acriflavin resistance protein, at 389,373 to 392,555
_RS01720
BPHYT_RS01725: BPHYT_RS01725 - hypothetical protein, at 392,983 to 393,195
_RS01725
BPHYT_RS01730: BPHYT_RS01730 - serine/threonine protein kinase, at 393,311 to 394,339
_RS01730
BPHYT_RS01735: BPHYT_RS01735 - membrane protein, at 394,367 to 396,268
_RS01735
Position (kb) 393
394
395 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 392.356 kb on + strand at 392.404 kb on + strand at 392.405 kb on - strand at 392.497 kb on - strand at 392.520 kb on - strand at 392.718 kb on + strand at 392.718 kb on + strand at 392.718 kb on + strand at 392.718 kb on + strand at 392.892 kb on + strand at 392.892 kb on + strand at 392.922 kb on + strand at 393.015 kb on + strand, within BPHYT_RS01725 at 393.085 kb on + strand, within BPHYT_RS01725 at 393.085 kb on + strand, within BPHYT_RS01725 at 393.221 kb on + strand at 393.221 kb on + strand at 393.222 kb on - strand at 393.476 kb on + strand, within BPHYT_RS01730 at 393.521 kb on + strand, within BPHYT_RS01730 at 393.640 kb on + strand, within BPHYT_RS01730 at 393.641 kb on - strand, within BPHYT_RS01730 at 394.563 kb on + strand, within BPHYT_RS01735 at 394.564 kb on - strand, within BPHYT_RS01735 at 394.564 kb on - strand, within BPHYT_RS01735 at 394.564 kb on - strand, within BPHYT_RS01735 at 394.622 kb on + strand, within BPHYT_RS01735 at 394.623 kb on - strand, within BPHYT_RS01735 at 394.819 kb on + strand at 394.820 kb on - strand, within BPHYT_RS01735 at 394.820 kb on - strand, within BPHYT_RS01735 at 395.169 kb on + strand, within BPHYT_RS01735 at 395.170 kb on - strand, within BPHYT_RS01735 at 395.170 kb on - strand, within BPHYT_RS01735 at 395.194 kb on + strand, within BPHYT_RS01735 at 395.194 kb on + strand, within BPHYT_RS01735 at 395.194 kb on + strand, within BPHYT_RS01735 at 395.194 kb on + strand, within BPHYT_RS01735 at 395.195 kb on - strand, within BPHYT_RS01735 at 395.195 kb on - strand, within BPHYT_RS01735 at 395.195 kb on - strand, within BPHYT_RS01735 at 395.195 kb on - strand, within BPHYT_RS01735 at 395.308 kb on - strand, within BPHYT_RS01735
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 392,356 + +0.3 392,404 + -0.5 392,405 - +0.3 392,497 - -0.7 392,520 - +0.4 392,718 + -0.3 392,718 + +1.4 392,718 + +2.2 392,718 + +0.2 392,892 + -0.0 392,892 + -0.6 392,922 + +0.6 393,015 + BPHYT_RS01725 0.15 -0.3 393,085 + BPHYT_RS01725 0.48 -0.4 393,085 + BPHYT_RS01725 0.48 -1.0 393,221 + +0.4 393,221 + -0.5 393,222 - +1.5 393,476 + BPHYT_RS01730 0.16 -2.0 393,521 + BPHYT_RS01730 0.20 +0.5 393,640 + BPHYT_RS01730 0.32 -2.8 393,641 - BPHYT_RS01730 0.32 -0.1 394,563 + BPHYT_RS01735 0.10 +0.5 394,564 - BPHYT_RS01735 0.10 +0.4 394,564 - BPHYT_RS01735 0.10 -0.1 394,564 - BPHYT_RS01735 0.10 -0.4 394,622 + BPHYT_RS01735 0.13 -0.4 394,623 - BPHYT_RS01735 0.13 -0.5 394,819 + +1.5 394,820 - BPHYT_RS01735 0.24 -0.1 394,820 - BPHYT_RS01735 0.24 -1.4 395,169 + BPHYT_RS01735 0.42 +0.1 395,170 - BPHYT_RS01735 0.42 +1.2 395,170 - BPHYT_RS01735 0.42 -0.6 395,194 + BPHYT_RS01735 0.43 -0.7 395,194 + BPHYT_RS01735 0.43 -0.3 395,194 + BPHYT_RS01735 0.43 +0.1 395,194 + BPHYT_RS01735 0.43 -0.4 395,195 - BPHYT_RS01735 0.44 +1.3 395,195 - BPHYT_RS01735 0.44 -0.3 395,195 - BPHYT_RS01735 0.44 -0.1 395,195 - BPHYT_RS01735 0.44 +0.4 395,308 - BPHYT_RS01735 0.49 +1.2
Or see this region's nucleotide sequence