Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS00660 and BPHYT_RS00665 overlap by 17 nucleotides BPHYT_RS00665 and BPHYT_RS00670 overlap by 11 nucleotides BPHYT_RS00670 and BPHYT_RS00675 are separated by 239 nucleotides
BPHYT_RS00660: BPHYT_RS00660 - 3-oxoacyl-ACP synthase, at 156,510 to 157,532
_RS00660
BPHYT_RS00665: BPHYT_RS00665 - phosphopantetheine-binding protein, at 157,516 to 157,794
_RS00665
BPHYT_RS00670: BPHYT_RS00670 - acyl-CoA dehydrogenase, at 157,784 to 159,094
_RS00670
BPHYT_RS00675: BPHYT_RS00675 - GntR family transcriptional regulator, at 159,334 to 160,170
_RS00675
Position (kb) 157
158
159
160 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 156.869 kb on + strand, within BPHYT_RS00660 at 157.152 kb on + strand, within BPHYT_RS00660 at 157.298 kb on - strand, within BPHYT_RS00660 at 157.384 kb on + strand, within BPHYT_RS00660 at 157.385 kb on - strand, within BPHYT_RS00660 at 157.437 kb on + strand at 157.474 kb on + strand at 157.820 kb on + strand at 157.820 kb on + strand at 157.821 kb on - strand at 157.821 kb on - strand at 158.090 kb on - strand, within BPHYT_RS00670 at 158.319 kb on + strand, within BPHYT_RS00670 at 158.320 kb on - strand, within BPHYT_RS00670 at 158.415 kb on + strand, within BPHYT_RS00670 at 158.488 kb on + strand, within BPHYT_RS00670 at 158.488 kb on + strand, within BPHYT_RS00670 at 158.489 kb on - strand, within BPHYT_RS00670 at 158.520 kb on + strand, within BPHYT_RS00670 at 158.642 kb on - strand at 158.642 kb on - strand, within BPHYT_RS00670 at 159.084 kb on + strand at 159.085 kb on - strand at 159.146 kb on + strand at 159.172 kb on + strand at 159.173 kb on - strand at 159.186 kb on - strand at 159.221 kb on + strand at 159.287 kb on + strand at 159.320 kb on + strand at 159.320 kb on + strand at 159.321 kb on - strand at 159.321 kb on - strand at 159.333 kb on + strand at 159.333 kb on + strand at 159.333 kb on + strand at 159.334 kb on - strand at 159.606 kb on + strand, within BPHYT_RS00675 at 159.607 kb on - strand, within BPHYT_RS00675 at 159.649 kb on + strand, within BPHYT_RS00675 at 159.650 kb on - strand, within BPHYT_RS00675 at 159.685 kb on + strand, within BPHYT_RS00675 at 159.685 kb on + strand, within BPHYT_RS00675 at 159.685 kb on + strand, within BPHYT_RS00675 at 159.686 kb on - strand, within BPHYT_RS00675 at 159.686 kb on - strand, within BPHYT_RS00675 at 159.714 kb on - strand, within BPHYT_RS00675 at 159.783 kb on - strand, within BPHYT_RS00675 at 159.921 kb on + strand, within BPHYT_RS00675 at 159.922 kb on - strand, within BPHYT_RS00675 at 159.961 kb on + strand, within BPHYT_RS00675 at 159.962 kb on - strand, within BPHYT_RS00675 at 159.962 kb on - strand, within BPHYT_RS00675
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 156,869 + BPHYT_RS00660 0.35 -0.4 157,152 + BPHYT_RS00660 0.63 +0.4 157,298 - BPHYT_RS00660 0.77 -0.1 157,384 + BPHYT_RS00660 0.85 -0.9 157,385 - BPHYT_RS00660 0.86 -0.6 157,437 + -0.1 157,474 + -1.5 157,820 + +0.9 157,820 + -0.3 157,821 - -0.3 157,821 - -0.7 158,090 - BPHYT_RS00670 0.23 +0.4 158,319 + BPHYT_RS00670 0.41 +0.6 158,320 - BPHYT_RS00670 0.41 -0.4 158,415 + BPHYT_RS00670 0.48 -0.1 158,488 + BPHYT_RS00670 0.54 -0.3 158,488 + BPHYT_RS00670 0.54 +1.2 158,489 - BPHYT_RS00670 0.54 -0.1 158,520 + BPHYT_RS00670 0.56 -1.9 158,642 - +4.3 158,642 - BPHYT_RS00670 0.65 -0.3 159,084 + -0.3 159,085 - +0.5 159,146 + -0.2 159,172 + -0.5 159,173 - -0.8 159,186 - +0.4 159,221 + -0.3 159,287 + -1.0 159,320 + +0.7 159,320 + +0.0 159,321 - -0.9 159,321 - -0.7 159,333 + -0.9 159,333 + -1.5 159,333 + +0.1 159,334 - +0.1 159,606 + BPHYT_RS00675 0.32 +0.3 159,607 - BPHYT_RS00675 0.33 -1.1 159,649 + BPHYT_RS00675 0.38 +0.1 159,650 - BPHYT_RS00675 0.38 -1.1 159,685 + BPHYT_RS00675 0.42 -0.4 159,685 + BPHYT_RS00675 0.42 -0.7 159,685 + BPHYT_RS00675 0.42 -1.8 159,686 - BPHYT_RS00675 0.42 -0.5 159,686 - BPHYT_RS00675 0.42 -1.8 159,714 - BPHYT_RS00675 0.45 -1.5 159,783 - BPHYT_RS00675 0.54 +0.6 159,921 + BPHYT_RS00675 0.70 -0.4 159,922 - BPHYT_RS00675 0.70 +3.1 159,961 + BPHYT_RS00675 0.75 -0.4 159,962 - BPHYT_RS00675 0.75 -0.2 159,962 - BPHYT_RS00675 0.75 -0.9
Or see this region's nucleotide sequence