Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS00650 and BPHYT_RS00655 are separated by 25 nucleotides BPHYT_RS00655 and BPHYT_RS00660 are separated by 2 nucleotides BPHYT_RS00660 and BPHYT_RS00665 overlap by 17 nucleotides BPHYT_RS00665 and BPHYT_RS00670 overlap by 11 nucleotides
BPHYT_RS00650: BPHYT_RS00650 - acyl-CoA ligase, at 153,915 to 155,534
_RS00650
BPHYT_RS00655: BPHYT_RS00655 - 3-oxoacyl-ACP synthase, at 155,560 to 156,507
_RS00655
BPHYT_RS00660: BPHYT_RS00660 - 3-oxoacyl-ACP synthase, at 156,510 to 157,532
_RS00660
BPHYT_RS00665: BPHYT_RS00665 - phosphopantetheine-binding protein, at 157,516 to 157,794
_RS00665
BPHYT_RS00670: BPHYT_RS00670 - acyl-CoA dehydrogenase, at 157,784 to 159,094
_RS00670
Position (kb) 156
157
158 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 155.711 kb on + strand, within BPHYT_RS00655 at 155.711 kb on + strand, within BPHYT_RS00655 at 155.711 kb on + strand, within BPHYT_RS00655 at 155.711 kb on + strand, within BPHYT_RS00655 at 155.711 kb on + strand, within BPHYT_RS00655 at 155.711 kb on + strand, within BPHYT_RS00655 at 155.711 kb on + strand, within BPHYT_RS00655 at 155.711 kb on + strand, within BPHYT_RS00655 at 155.858 kb on + strand, within BPHYT_RS00655 at 155.859 kb on - strand, within BPHYT_RS00655 at 155.859 kb on - strand, within BPHYT_RS00655 at 155.909 kb on + strand, within BPHYT_RS00655 at 155.924 kb on + strand, within BPHYT_RS00655 at 156.268 kb on - strand, within BPHYT_RS00655 at 156.512 kb on - strand at 156.523 kb on + strand at 156.524 kb on - strand at 156.524 kb on - strand at 156.524 kb on - strand at 156.615 kb on + strand, within BPHYT_RS00660 at 156.615 kb on + strand, within BPHYT_RS00660 at 156.615 kb on + strand, within BPHYT_RS00660 at 156.648 kb on + strand, within BPHYT_RS00660 at 156.649 kb on - strand, within BPHYT_RS00660 at 156.649 kb on - strand, within BPHYT_RS00660 at 156.649 kb on - strand, within BPHYT_RS00660 at 156.652 kb on + strand, within BPHYT_RS00660 at 156.734 kb on + strand, within BPHYT_RS00660 at 156.734 kb on + strand, within BPHYT_RS00660 at 156.735 kb on - strand, within BPHYT_RS00660 at 156.869 kb on + strand, within BPHYT_RS00660 at 157.152 kb on + strand, within BPHYT_RS00660 at 157.298 kb on - strand, within BPHYT_RS00660 at 157.384 kb on + strand, within BPHYT_RS00660 at 157.385 kb on - strand, within BPHYT_RS00660 at 157.437 kb on + strand at 157.474 kb on + strand at 157.820 kb on + strand at 157.820 kb on + strand at 157.821 kb on - strand at 157.821 kb on - strand at 158.090 kb on - strand, within BPHYT_RS00670 at 158.319 kb on + strand, within BPHYT_RS00670 at 158.320 kb on - strand, within BPHYT_RS00670 at 158.415 kb on + strand, within BPHYT_RS00670 at 158.488 kb on + strand, within BPHYT_RS00670 at 158.488 kb on + strand, within BPHYT_RS00670 at 158.489 kb on - strand, within BPHYT_RS00670 at 158.520 kb on + strand, within BPHYT_RS00670
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 155,711 + BPHYT_RS00655 0.16 +3.8 155,711 + BPHYT_RS00655 0.16 -1.6 155,711 + BPHYT_RS00655 0.16 -0.0 155,711 + BPHYT_RS00655 0.16 -0.5 155,711 + BPHYT_RS00655 0.16 -0.3 155,711 + BPHYT_RS00655 0.16 -0.3 155,711 + BPHYT_RS00655 0.16 -0.1 155,711 + BPHYT_RS00655 0.16 -0.3 155,858 + BPHYT_RS00655 0.31 +1.3 155,859 - BPHYT_RS00655 0.32 +0.3 155,859 - BPHYT_RS00655 0.32 -0.3 155,909 + BPHYT_RS00655 0.37 -0.7 155,924 + BPHYT_RS00655 0.38 +1.1 156,268 - BPHYT_RS00655 0.75 +0.4 156,512 - +0.1 156,523 + -0.1 156,524 - -1.7 156,524 - +1.3 156,524 - +0.8 156,615 + BPHYT_RS00660 0.10 -0.3 156,615 + BPHYT_RS00660 0.10 +0.0 156,615 + BPHYT_RS00660 0.10 -1.0 156,648 + BPHYT_RS00660 0.13 -0.0 156,649 - BPHYT_RS00660 0.14 -0.3 156,649 - BPHYT_RS00660 0.14 -0.1 156,649 - BPHYT_RS00660 0.14 +0.3 156,652 + BPHYT_RS00660 0.14 -0.2 156,734 + BPHYT_RS00660 0.22 +0.5 156,734 + BPHYT_RS00660 0.22 -1.1 156,735 - BPHYT_RS00660 0.22 +0.1 156,869 + BPHYT_RS00660 0.35 -0.4 157,152 + BPHYT_RS00660 0.63 +0.4 157,298 - BPHYT_RS00660 0.77 -0.1 157,384 + BPHYT_RS00660 0.85 -0.9 157,385 - BPHYT_RS00660 0.86 -0.6 157,437 + -0.1 157,474 + -1.5 157,820 + +0.9 157,820 + -0.3 157,821 - -0.3 157,821 - -0.7 158,090 - BPHYT_RS00670 0.23 +0.4 158,319 + BPHYT_RS00670 0.41 +0.6 158,320 - BPHYT_RS00670 0.41 -0.4 158,415 + BPHYT_RS00670 0.48 -0.1 158,488 + BPHYT_RS00670 0.54 -0.3 158,488 + BPHYT_RS00670 0.54 +1.2 158,489 - BPHYT_RS00670 0.54 -0.1 158,520 + BPHYT_RS00670 0.56 -1.9
Or see this region's nucleotide sequence