Experiment: MoLS4 minimal media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1510 and DvMF_1511 are separated by 206 nucleotides DvMF_1511 and DvMF_1512 are separated by 146 nucleotides DvMF_1512 and DvMF_1513 are separated by 376 nucleotides
DvMF_1510: DvMF_1510 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 1,861,644 to 1,863,056
_1510
DvMF_1511: DvMF_1511 - hypothetical protein (RefSeq), at 1,863,263 to 1,864,009
_1511
DvMF_1512: DvMF_1512 - endoribonuclease L-PSP (RefSeq), at 1,864,156 to 1,864,542
_1512
DvMF_1513: DvMF_1513 - metal dependent phosphohydrolase (RefSeq), at 1,864,919 to 1,865,803
_1513
Position (kb)
1863
1864
1865 Strain fitness (log2 ratio)
-2
-1
0
1 at 1862.286 kb on - strand, within DvMF_1510 at 1862.305 kb on - strand, within DvMF_1510 at 1862.437 kb on + strand, within DvMF_1510 at 1862.460 kb on - strand, within DvMF_1510 at 1862.491 kb on - strand, within DvMF_1510 at 1862.540 kb on + strand, within DvMF_1510 at 1862.610 kb on - strand, within DvMF_1510 at 1862.686 kb on - strand, within DvMF_1510 at 1862.938 kb on + strand at 1863.481 kb on + strand, within DvMF_1511 at 1863.631 kb on - strand, within DvMF_1511 at 1863.678 kb on + strand, within DvMF_1511 at 1863.686 kb on - strand, within DvMF_1511 at 1863.817 kb on + strand, within DvMF_1511 at 1863.825 kb on - strand, within DvMF_1511 at 1864.081 kb on - strand at 1864.140 kb on + strand at 1864.167 kb on - strand at 1864.509 kb on - strand at 1865.009 kb on - strand, within DvMF_1513
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media remove 1,862,286 - DvMF_1510 0.45 -0.7 1,862,305 - DvMF_1510 0.47 -0.7 1,862,437 + DvMF_1510 0.56 -0.0 1,862,460 - DvMF_1510 0.58 -1.0 1,862,491 - DvMF_1510 0.60 -0.9 1,862,540 + DvMF_1510 0.63 -0.5 1,862,610 - DvMF_1510 0.68 +0.1 1,862,686 - DvMF_1510 0.74 -0.6 1,862,938 + -0.8 1,863,481 + DvMF_1511 0.29 -0.4 1,863,631 - DvMF_1511 0.49 -1.1 1,863,678 + DvMF_1511 0.56 -2.5 1,863,686 - DvMF_1511 0.57 -0.8 1,863,817 + DvMF_1511 0.74 -0.5 1,863,825 - DvMF_1511 0.75 +0.5 1,864,081 - -0.4 1,864,140 + -0.3 1,864,167 - +1.0 1,864,509 - -0.5 1,865,009 - DvMF_1513 0.10 +0.7
Or see this region's nucleotide sequence