Experiment: MoLS4 minimal media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1146 and DvMF_1147 are separated by 966 nucleotides DvMF_1147 and DvMF_1148 are separated by 292 nucleotides
DvMF_1146: DvMF_1146 - hypothetical protein (RefSeq), at 1,404,754 to 1,405,446
_1146
DvMF_1147: DvMF_1147 - L-lactate permease family protein, putative (RefSeq), at 1,406,413 to 1,407,966
_1147
DvMF_1148: DvMF_1148 - TrkA-N domain protein (RefSeq), at 1,408,259 to 1,410,103
_1148
Position (kb)
1406
1407
1408 Strain fitness (log2 ratio)
-2
-1
0
1 at 1405.414 kb on + strand at 1405.414 kb on + strand at 1405.414 kb on + strand at 1405.422 kb on - strand at 1405.422 kb on - strand at 1405.748 kb on + strand at 1405.820 kb on + strand at 1405.875 kb on + strand at 1405.933 kb on + strand at 1405.941 kb on - strand at 1406.094 kb on - strand at 1406.414 kb on + strand at 1406.615 kb on - strand, within DvMF_1147 at 1406.820 kb on - strand, within DvMF_1147 at 1406.864 kb on - strand, within DvMF_1147 at 1406.905 kb on + strand, within DvMF_1147 at 1407.006 kb on - strand, within DvMF_1147 at 1407.076 kb on - strand, within DvMF_1147 at 1407.106 kb on - strand, within DvMF_1147 at 1407.329 kb on + strand, within DvMF_1147 at 1407.337 kb on - strand, within DvMF_1147 at 1407.337 kb on - strand, within DvMF_1147 at 1407.444 kb on + strand, within DvMF_1147 at 1407.465 kb on - strand, within DvMF_1147 at 1407.488 kb on - strand, within DvMF_1147 at 1407.679 kb on - strand, within DvMF_1147 at 1407.742 kb on - strand, within DvMF_1147 at 1407.918 kb on + strand at 1407.948 kb on + strand at 1407.948 kb on + strand at 1407.948 kb on + strand at 1407.948 kb on + strand at 1407.948 kb on + strand at 1407.948 kb on + strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.973 kb on + strand at 1407.980 kb on - strand at 1408.112 kb on + strand at 1408.389 kb on - strand at 1408.399 kb on - strand at 1408.440 kb on - strand at 1408.507 kb on + strand, within DvMF_1148 at 1408.645 kb on - strand, within DvMF_1148 at 1408.682 kb on + strand, within DvMF_1148 at 1408.682 kb on + strand, within DvMF_1148 at 1408.690 kb on - strand, within DvMF_1148 at 1408.690 kb on - strand, within DvMF_1148 at 1408.720 kb on + strand, within DvMF_1148 at 1408.807 kb on + strand, within DvMF_1148 at 1408.940 kb on + strand, within DvMF_1148 at 1408.953 kb on - strand, within DvMF_1148 at 1408.961 kb on + strand, within DvMF_1148
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media remove 1,405,414 + -0.0 1,405,414 + -0.7 1,405,414 + -1.0 1,405,422 - +0.3 1,405,422 - -0.2 1,405,748 + -0.7 1,405,820 + -0.3 1,405,875 + -0.5 1,405,933 + -0.5 1,405,941 - -0.7 1,406,094 - -0.8 1,406,414 + -0.0 1,406,615 - DvMF_1147 0.13 -0.9 1,406,820 - DvMF_1147 0.26 -0.0 1,406,864 - DvMF_1147 0.29 -0.7 1,406,905 + DvMF_1147 0.32 -1.0 1,407,006 - DvMF_1147 0.38 -0.7 1,407,076 - DvMF_1147 0.43 +0.1 1,407,106 - DvMF_1147 0.45 -0.5 1,407,329 + DvMF_1147 0.59 -1.3 1,407,337 - DvMF_1147 0.59 -0.7 1,407,337 - DvMF_1147 0.59 -0.0 1,407,444 + DvMF_1147 0.66 -0.8 1,407,465 - DvMF_1147 0.68 -0.8 1,407,488 - DvMF_1147 0.69 -0.2 1,407,679 - DvMF_1147 0.81 -1.0 1,407,742 - DvMF_1147 0.86 -0.2 1,407,918 + +0.2 1,407,948 + -0.5 1,407,948 + +0.3 1,407,948 + -0.5 1,407,948 + -0.5 1,407,948 + -0.8 1,407,948 + -0.9 1,407,956 - +0.2 1,407,956 - -1.9 1,407,956 - -0.6 1,407,956 - -2.2 1,407,956 - -0.5 1,407,956 - -0.8 1,407,956 - -1.3 1,407,956 - -0.5 1,407,973 + -1.3 1,407,980 - -0.4 1,408,112 + -0.5 1,408,389 - +0.0 1,408,399 - -2.0 1,408,440 - -1.5 1,408,507 + DvMF_1148 0.13 -0.8 1,408,645 - DvMF_1148 0.21 -0.4 1,408,682 + DvMF_1148 0.23 -0.6 1,408,682 + DvMF_1148 0.23 -0.3 1,408,690 - DvMF_1148 0.23 -1.3 1,408,690 - DvMF_1148 0.23 -1.8 1,408,720 + DvMF_1148 0.25 -0.2 1,408,807 + DvMF_1148 0.30 +0.3 1,408,940 + DvMF_1148 0.37 -0.1 1,408,953 - DvMF_1148 0.38 -0.5 1,408,961 + DvMF_1148 0.38 -0.8
Or see this region's nucleotide sequence