Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2138

Experiment: Formate/Acetate-Sulfate (60/1-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/1-30 mM)
2,234,675	-	sucCD	DVU2137	0.61	+0.1
2,234,708	+	sucCD	DVU2137	0.63	-0.5
2,235,017	-	sucCD	DVU2137	0.77	+0.7
2,235,073	-	sucCD	DVU2137	0.80	-0.2
2,235,143	+	sucCD	DVU2137	0.83	-0.7
2,235,167	-	sucCD	DVU2137	0.84	+0.1
2,235,236	-	sucCD	DVU2137	0.88	+0.6
2,235,538	+				-0.0
2,235,702	-		DVU2138	0.25	-0.8
2,235,724	-		DVU2138	0.29	-1.0
2,235,754	+		DVU2138	0.33	-2.2
2,235,941	+		DVU2138	0.62	-0.4
2,235,993	-		DVU2138	0.70	-1.9
2,236,043	+		DVU2138	0.77	-0.9
2,236,170	-				-0.1
2,236,170	-				-0.4
2,236,171	+				+0.9
2,236,206	+				+1.2
2,236,214	-				+0.6
2,236,422	-	aphA	DVU2139	0.14	-1.1
2,236,452	+	aphA	DVU2139	0.16	-1.3
2,236,474	-	aphA	DVU2139	0.17	+0.1
2,236,540	+	aphA	DVU2139	0.23	-1.1
2,236,545	+	aphA	DVU2139	0.23	-1.5
2,236,616	-	aphA	DVU2139	0.28	-0.5
2,236,619	+	aphA	DVU2139	0.28	-1.4
2,236,627	-	aphA	DVU2139	0.29	-1.1
2,236,645	+	aphA	DVU2139	0.30	-1.3
2,236,742	+	aphA	DVU2139	0.38	-2.0
2,236,786	-	aphA	DVU2139	0.41	+0.1
2,236,851	-	aphA	DVU2139	0.46	-0.8
2,237,017	+	aphA	DVU2139	0.59	-1.4
2,237,023	-	aphA	DVU2139	0.59	-1.0
2,237,033	-	aphA	DVU2139	0.60	+0.9
2,237,056	-	aphA	DVU2139	0.62	-0.8
2,237,148	-	aphA	DVU2139	0.69	-0.4
2,237,148	-	aphA	DVU2139	0.69	-1.2