Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0830
Experiment: Formate/Acetate-Sulfate (60/1-30 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/1-30 mM) |
|---|---|---|---|---|---|
| remove | |||||
| 919,986 | + | ptsI | DVU0829 | 0.50 | -0.5 |
| 919,986 | + | ptsI | DVU0829 | 0.50 | -0.3 |
| 919,989 | - | ptsI | DVU0829 | 0.50 | -0.3 |
| 919,989 | - | ptsI | DVU0829 | 0.50 | -0.5 |
| 919,989 | - | ptsI | DVU0829 | 0.50 | -0.6 |
| 919,989 | - | ptsI | DVU0829 | 0.50 | +0.2 |
| 919,989 | - | ptsI | DVU0829 | 0.50 | -0.4 |
| 920,050 | - | ptsI | DVU0829 | 0.54 | -0.7 |
| 920,141 | + | ptsI | DVU0829 | 0.59 | -0.3 |
| 920,314 | - | ptsI | DVU0829 | 0.69 | +0.7 |
| 921,108 | - | ptsH | DVU0830 | 0.87 | -0.7 |
| 921,231 | - | +0.4 | |||
| 921,384 | + | DVU0831 | 0.24 | +0.2 | |
| 921,384 | + | DVU0831 | 0.24 | -0.7 | |
| 921,428 | - | DVU0831 | 0.30 | +0.4 | |
| 921,475 | + | DVU0831 | 0.36 | -0.1 | |
| 921,482 | - | DVU0831 | 0.37 | +2.5 | |
| 921,493 | + | DVU0831 | 0.38 | +0.0 | |
| 921,557 | - | DVU0831 | 0.47 | +0.4 | |
| 921,583 | + | DVU0831 | 0.50 | -0.6 | |
| 921,594 | + | DVU0831 | 0.52 | +0.1 | |
| 921,708 | - | DVU0831 | 0.67 | -0.0 | |
| 921,819 | + | DVU0831 | 0.81 | +0.4 | |
| 921,933 | + | -2.1 | |||
| 921,941 | - | +0.0 | |||
| 922,102 | + | -0.6 |
Or see this region's nucleotide sequence