Experiment: MoLS4 minimal media with D,L-Histidine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1078 and DvMF_1079 overlap by 4 nucleotides DvMF_1079 and DvMF_1080 are separated by 143 nucleotides DvMF_1080 and DvMF_1081 are separated by 497 nucleotides DvMF_1081 and DvMF_1082 are separated by 142 nucleotides
DvMF_1078: DvMF_1078 - hypothetical protein (RefSeq), at 1,318,795 to 1,319,331
_1078
DvMF_1079: DvMF_1079 - hypothetical protein (RefSeq), at 1,319,328 to 1,319,684
_1079
DvMF_1080: DvMF_1080 - hypothetical protein (RefSeq), at 1,319,828 to 1,320,598
_1080
DvMF_1081: DvMF_1081 - hypothetical protein (RefSeq), at 1,321,096 to 1,321,299
_1081
DvMF_1082: DvMF_1082 - hypothetical protein (RefSeq), at 1,321,442 to 1,321,846
_1082
Position (kb)
1319
1320
1321 Strain fitness (log2 ratio)
-2
-1
0
1 at 1318.970 kb on + strand, within DvMF_1078 at 1319.042 kb on - strand, within DvMF_1078 at 1319.084 kb on + strand, within DvMF_1078 at 1319.106 kb on - strand, within DvMF_1078 at 1319.108 kb on + strand, within DvMF_1078 at 1319.298 kb on - strand at 1319.306 kb on + strand at 1319.478 kb on + strand, within DvMF_1079 at 1319.735 kb on + strand at 1319.814 kb on - strand at 1319.908 kb on + strand, within DvMF_1080 at 1319.982 kb on - strand, within DvMF_1080 at 1320.016 kb on - strand, within DvMF_1080 at 1320.065 kb on - strand, within DvMF_1080 at 1320.110 kb on + strand, within DvMF_1080 at 1320.110 kb on + strand, within DvMF_1080 at 1320.146 kb on - strand, within DvMF_1080 at 1320.232 kb on - strand, within DvMF_1080 at 1320.233 kb on - strand, within DvMF_1080 at 1320.638 kb on - strand at 1320.701 kb on - strand at 1320.793 kb on - strand at 1320.929 kb on + strand at 1320.950 kb on - strand at 1321.045 kb on - strand at 1321.145 kb on + strand, within DvMF_1081 at 1321.578 kb on - strand, within DvMF_1082
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with D,L-Histidine remove 1,318,970 + DvMF_1078 0.33 -0.3 1,319,042 - DvMF_1078 0.46 -0.9 1,319,084 + DvMF_1078 0.54 -0.5 1,319,106 - DvMF_1078 0.58 +0.5 1,319,108 + DvMF_1078 0.58 +0.0 1,319,298 - +0.5 1,319,306 + -0.7 1,319,478 + DvMF_1079 0.42 -0.8 1,319,735 + +0.2 1,319,814 - +0.1 1,319,908 + DvMF_1080 0.10 +0.4 1,319,982 - DvMF_1080 0.20 -0.7 1,320,016 - DvMF_1080 0.24 +0.8 1,320,065 - DvMF_1080 0.31 -0.3 1,320,110 + DvMF_1080 0.37 -0.6 1,320,110 + DvMF_1080 0.37 -0.8 1,320,146 - DvMF_1080 0.41 -0.4 1,320,232 - DvMF_1080 0.52 +0.1 1,320,233 - DvMF_1080 0.53 +1.0 1,320,638 - -0.1 1,320,701 - -0.7 1,320,793 - -0.5 1,320,929 + +0.2 1,320,950 - -0.7 1,321,045 - -1.8 1,321,145 + DvMF_1081 0.24 -0.1 1,321,578 - DvMF_1082 0.34 -0.7
Or see this region's nucleotide sequence