Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0238
Experiment: Formate/Acetate-Sulfate (60/5-30 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/5-30 mM) |
|---|---|---|---|---|---|
| remove | |||||
| 272,016 | + | -0.2 | |||
| 272,022 | + | -0.2 | |||
| 272,164 | - | DVU0238 | 0.31 | -1.0 | |
| 272,187 | + | DVU0238 | 0.36 | -0.6 | |
| 272,243 | - | DVU0238 | 0.51 | +0.3 | |
| 272,299 | - | DVU0238 | 0.65 | -1.7 | |
| 272,299 | - | DVU0238 | 0.65 | -0.1 | |
| 272,309 | + | DVU0238 | 0.68 | -0.1 | |
| 272,383 | + | DVU0238 | 0.87 | -0.6 | |
| 272,416 | + | +0.5 | |||
| 272,506 | - | -0.4 | |||
| 272,855 | + | -0.8 | |||
| 272,863 | - | +0.7 | |||
| 272,863 | - | -0.5 | |||
| 272,923 | + | -0.3 | |||
| 272,928 | + | +0.7 | |||
| 273,099 | - | DVU0240 | 0.32 | +0.1 | |
| 273,135 | - | DVU0240 | 0.40 | +0.1 | |
| 273,181 | - | DVU0240 | 0.52 | -0.2 | |
| 273,212 | + | DVU0240 | 0.59 | -0.1 | |
| 273,220 | - | DVU0240 | 0.61 | -0.1 | |
| 273,268 | - | DVU0240 | 0.73 | +0.6 | |
| 273,280 | - | DVU0240 | 0.76 | +0.0 | |
| 273,336 | + | DVU0240 | 0.90 | +0.1 | |
| 273,351 | - | +0.1 | |||
| 273,421 | - | -0.5 | |||
| 273,433 | - | +0.2 |
Or see this region's nucleotide sequence