Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3387

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
3,560,504	-		DVU3386	0.76	+0.1
3,560,590	+		DVU3386	0.83	+0.4
3,560,637	+		DVU3386	0.86	-0.7
3,560,637	+		DVU3386	0.86	-1.1
3,560,639	+		DVU3386	0.86	+0.4
3,560,640	-		DVU3386	0.86	+0.2
3,560,645	-		DVU3386	0.87	-0.0
3,560,711	-				+0.0
3,560,737	+				+0.3
3,560,737	+				+1.0
3,560,737	+				+1.3
3,560,875	+				-0.6
3,560,879	+				+0.4
3,560,883	-				-1.1
3,560,893	+				+0.1
3,560,932	-				+1.2
3,561,020	+				-0.3
3,561,058	+				-0.2
3,561,066	-				-0.0
3,561,138	+				+1.6
3,561,146	-				-0.1
3,561,242	+				-0.3
3,561,250	-				-0.2
3,561,270	+				-0.5
3,561,311	-				+0.0
3,561,322	+				-0.1
3,561,322	+				-0.6
3,561,322	+				-0.3
3,561,322	+				+0.5
3,561,322	+				-0.1
3,561,322	+				-0.7
3,561,322	+				-2.1
3,561,322	+				+0.1
3,561,322	+				+0.2
3,561,322	+				-1.0
3,561,323	+				-0.1
3,561,323	+				+1.1
3,561,323	+				-1.2
3,561,324	+				-0.1
3,561,330	-				-0.2
3,561,330	-				+2.1
3,561,330	-				+1.1
3,561,330	-				+0.1
3,561,330	-				-1.1
3,561,330	-				+0.2
3,561,330	-				-0.2
3,561,330	-				+0.5
3,561,330	-				+0.8
3,561,331	-				+0.4
3,561,331	-				-0.1
3,561,331	-				-0.7
3,561,331	-				-0.3
3,561,331	-				-0.4
3,561,362	+				-1.1
3,561,390	-				-0.1
3,561,425	+				+0.0
3,561,500	+				-1.2
3,561,518	+				-0.2
3,561,518	+				+0.3
3,561,585	+				+0.7
3,561,617	-		DVU3387	0.11	+0.6
3,561,626	-		DVU3387	0.12	+0.7
3,561,682	+		DVU3387	0.18	+1.0
3,561,690	-		DVU3387	0.19	+0.7
3,561,719	+		DVU3387	0.21	+0.3
3,561,729	+		DVU3387	0.22	-0.1
3,561,732	-		DVU3387	0.23	+0.2
3,561,748	-		DVU3387	0.24	+0.2
3,561,759	+		DVU3387	0.25	+0.7
3,561,759	+		DVU3387	0.25	+2.2
3,561,764	+		DVU3387	0.26	+1.3
3,561,781	+		DVU3387	0.28	+0.7
3,561,836	-		DVU3387	0.33	+0.2
3,561,858	-		DVU3387	0.35	+1.3
3,561,912	-		DVU3387	0.40	+0.7
3,561,934	+		DVU3387	0.43	+0.6
3,561,944	+		DVU3387	0.44	+0.8
3,561,947	-		DVU3387	0.44	-0.3
3,562,059	+		DVU3387	0.55	+0.9
3,562,095	-		DVU3387	0.58	+0.7
3,562,115	-		DVU3387	0.60	+0.7
3,562,120	+		DVU3387	0.61	-1.6
3,562,128	-		DVU3387	0.62	+0.5
3,562,142	-		DVU3387	0.63	+0.8
3,562,195	+		DVU3387	0.68	+0.6
3,562,203	-		DVU3387	0.69	+0.4
3,562,243	-		DVU3387	0.73	+0.2
3,562,266	-		DVU3387	0.75	+0.5
3,562,266	-		DVU3387	0.75	+2.4
3,562,302	+		DVU3387	0.79	+0.4
3,562,336	+		DVU3387	0.82	+1.8
3,562,346	-		DVU3387	0.83	+3.0
3,562,417	+				+0.7
3,562,471	-				+0.4
3,562,480	+				+0.7
3,562,482	-				+1.2
3,562,538	-				-0.2
3,562,545	+				-0.1
3,562,549	-				+1.0
3,562,572	-				-0.1
3,562,655	+				-0.3
3,562,666	+				-0.0
3,562,705	-				-1.2
3,562,707	-				-0.6
3,562,709	+				+0.8
3,562,717	-				-0.3
3,562,747	+				-0.2
3,562,752	-				-1.0
3,562,852	-		DVU3388	0.20	-0.2
3,562,852	-		DVU3388	0.20	-0.2
3,562,888	+		DVU3388	0.25	-0.3
3,562,939	-		DVU3388	0.31	+0.2
3,562,945	+		DVU3388	0.32	+0.0
3,562,945	+		DVU3388	0.32	-0.2
3,562,983	+		DVU3388	0.36	-0.0
3,562,984	+		DVU3388	0.36	-0.2
3,562,992	-		DVU3388	0.37	-0.3
3,563,046	+		DVU3388	0.44	+0.5
3,563,054	+		DVU3388	0.45	+0.5
3,563,081	+		DVU3388	0.48	+0.4
3,563,137	+		DVU3388	0.55	-0.6
3,563,165	-		DVU3388	0.58	-0.2
3,563,187	+		DVU3388	0.61	+0.1
3,563,187	+		DVU3388	0.61	-1.0
3,563,228	-		DVU3388	0.66	+0.2
3,563,265	+		DVU3388	0.70	-0.1
3,563,298	+		DVU3388	0.74	-0.1
3,563,298	-		DVU3388	0.74	+0.0
3,563,298	-		DVU3388	0.74	-0.2
3,563,339	+		DVU3388	0.79	-0.0
3,563,418	-		DVU3388	0.89	+0.4
3,563,435	+				-0.4
3,563,492	+				-0.3