Experiment: Formate/Acetate-Sulfate (60/5-30 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0674 and fliY are separated by 29 nucleotides fliY and artQ are separated by 71 nucleotides artQ and DVU0677 are separated by 281 nucleotides
DVU0674: DVU0674 - ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR), at 746,331 to 747,146
DVU0674
DVU0675: fliY - amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR), at 747,176 to 747,997
fliY
DVU0676: artQ - amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR), at 748,069 to 748,956
artQ
DVU0677: DVU0677 - transglycosylase domain protein (TIGR), at 749,238 to 750,287
DVU0677
Position (kb) 748
749 Strain fitness (log2 ratio) -2
-1
0
1
2 at 747.149 kb on - strand at 747.176 kb on - strand at 747.176 kb on - strand at 747.191 kb on - strand at 747.302 kb on - strand, within fliY at 747.354 kb on - strand, within fliY at 747.360 kb on - strand, within fliY at 747.454 kb on - strand, within fliY at 747.461 kb on - strand, within fliY at 747.489 kb on + strand, within fliY at 747.502 kb on + strand, within fliY at 747.527 kb on - strand, within fliY at 747.527 kb on - strand, within fliY at 747.542 kb on + strand, within fliY at 747.550 kb on - strand, within fliY at 747.691 kb on + strand, within fliY at 747.721 kb on - strand, within fliY at 747.753 kb on + strand, within fliY at 747.761 kb on - strand, within fliY at 747.761 kb on - strand, within fliY at 747.776 kb on + strand, within fliY at 747.784 kb on - strand, within fliY at 747.807 kb on - strand, within fliY at 747.859 kb on - strand, within fliY at 747.865 kb on - strand, within fliY at 747.915 kb on + strand at 747.915 kb on + strand at 747.984 kb on + strand at 748.061 kb on - strand at 748.090 kb on - strand at 748.152 kb on - strand at 748.155 kb on + strand at 748.213 kb on + strand, within artQ at 748.213 kb on + strand, within artQ at 748.272 kb on + strand, within artQ at 748.295 kb on - strand, within artQ at 748.306 kb on - strand, within artQ at 748.510 kb on - strand, within artQ at 748.551 kb on + strand, within artQ at 748.598 kb on - strand, within artQ at 748.695 kb on - strand, within artQ at 748.758 kb on - strand, within artQ at 748.791 kb on + strand, within artQ at 748.854 kb on - strand, within artQ at 748.889 kb on - strand at 748.889 kb on - strand at 748.925 kb on + strand at 749.073 kb on + strand at 749.106 kb on + strand at 749.119 kb on - strand at 749.145 kb on + strand at 749.153 kb on - strand at 749.178 kb on + strand at 749.181 kb on - strand at 749.186 kb on - strand at 749.192 kb on - strand at 749.202 kb on - strand at 749.254 kb on - strand at 749.261 kb on + strand at 749.261 kb on + strand at 749.274 kb on - strand at 749.278 kb on + strand at 749.344 kb on - strand, within DVU0677 at 749.408 kb on + strand, within DVU0677 at 749.428 kb on - strand, within DVU0677 at 749.564 kb on + strand, within DVU0677 at 749.749 kb on + strand, within DVU0677 at 749.749 kb on + strand, within DVU0677 at 749.778 kb on - strand, within DVU0677 at 749.812 kb on - strand, within DVU0677 at 749.821 kb on + strand, within DVU0677 at 749.865 kb on - strand, within DVU0677 at 749.909 kb on + strand, within DVU0677
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfate (60/5-30 mM) remove 747,149 - -0.8 747,176 - +0.0 747,176 - -0.2 747,191 - -0.4 747,302 - fliY DVU0675 0.15 -0.4 747,354 - fliY DVU0675 0.22 -0.8 747,360 - fliY DVU0675 0.22 -0.2 747,454 - fliY DVU0675 0.34 +1.3 747,461 - fliY DVU0675 0.35 -0.3 747,489 + fliY DVU0675 0.38 -0.3 747,502 + fliY DVU0675 0.40 -0.1 747,527 - fliY DVU0675 0.43 -0.2 747,527 - fliY DVU0675 0.43 -0.1 747,542 + fliY DVU0675 0.45 -0.4 747,550 - fliY DVU0675 0.45 +1.4 747,691 + fliY DVU0675 0.63 -0.3 747,721 - fliY DVU0675 0.66 +0.0 747,753 + fliY DVU0675 0.70 -0.6 747,761 - fliY DVU0675 0.71 -0.7 747,761 - fliY DVU0675 0.71 -0.0 747,776 + fliY DVU0675 0.73 +2.2 747,784 - fliY DVU0675 0.74 -0.5 747,807 - fliY DVU0675 0.77 +0.1 747,859 - fliY DVU0675 0.83 -0.2 747,865 - fliY DVU0675 0.84 +0.8 747,915 + +0.2 747,915 + -0.3 747,984 + -0.3 748,061 - -0.2 748,090 - +0.3 748,152 - -0.4 748,155 + -0.3 748,213 + artQ DVU0676 0.16 -0.1 748,213 + artQ DVU0676 0.16 -2.6 748,272 + artQ DVU0676 0.23 -0.6 748,295 - artQ DVU0676 0.25 -0.4 748,306 - artQ DVU0676 0.27 -1.9 748,510 - artQ DVU0676 0.50 -0.3 748,551 + artQ DVU0676 0.54 -0.6 748,598 - artQ DVU0676 0.60 +0.2 748,695 - artQ DVU0676 0.70 -1.3 748,758 - artQ DVU0676 0.78 -1.0 748,791 + artQ DVU0676 0.81 -0.9 748,854 - artQ DVU0676 0.88 -0.3 748,889 - +0.0 748,889 - +0.0 748,925 + -0.2 749,073 + -1.6 749,106 + -0.5 749,119 - -0.2 749,145 + +0.7 749,153 - -0.2 749,178 + -0.3 749,181 - -0.0 749,186 - -0.3 749,192 - -0.1 749,202 - -0.4 749,254 - +0.7 749,261 + -2.0 749,261 + -0.2 749,274 - +0.2 749,278 + -0.2 749,344 - DVU0677 0.10 +0.4 749,408 + DVU0677 0.16 +0.0 749,428 - DVU0677 0.18 -0.0 749,564 + DVU0677 0.31 +0.4 749,749 + DVU0677 0.49 -0.3 749,749 + DVU0677 0.49 -0.4 749,778 - DVU0677 0.51 -0.1 749,812 - DVU0677 0.55 +0.3 749,821 + DVU0677 0.56 -0.5 749,865 - DVU0677 0.60 -1.4 749,909 + DVU0677 0.64 -0.1
Or see this region's nucleotide sequence