Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_932

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
1,096,960	+				-0.8
1,096,960	+				-0.5
1,096,960	+				+1.3
1,096,960	+				+1.4
1,096,960	+				-0.2
1,096,960	+				-0.2
1,096,960	+				+0.3
1,096,961	-				-1.1
1,097,032	+				+0.6
1,097,032	+				+0.3
1,097,032	+				+1.2
1,097,033	-				-0.3
1,097,033	-				-0.1
1,097,033	-				+0.7
1,097,037	-				-0.4
1,097,037	-				-0.4
1,097,055	+		Pf6N2E2_931	0.12	+0.1
1,097,056	-		Pf6N2E2_931	0.13	+0.3
1,097,072	+		Pf6N2E2_931	0.21	-0.2
1,097,073	-		Pf6N2E2_931	0.21	-0.3
1,097,073	-		Pf6N2E2_931	0.21	+0.0
1,097,073	-		Pf6N2E2_931	0.21	+1.8
1,097,073	-		Pf6N2E2_931	0.21	-1.6
1,097,177	-		Pf6N2E2_931	0.74	-0.1
1,097,177	-		Pf6N2E2_931	0.74	+0.8
1,097,177	-		Pf6N2E2_931	0.74	-1.0
1,097,177	-		Pf6N2E2_931	0.74	-0.0
1,097,177	-		Pf6N2E2_931	0.74	-0.7
1,097,194	-		Pf6N2E2_931	0.82	-1.0
1,097,198	-		Pf6N2E2_931	0.84	+0.3
1,097,198	-		Pf6N2E2_931	0.84	+0.0
1,097,353	+				-0.8
1,097,354	-				+0.3
1,097,354	-				-0.6
1,097,354	-				+1.4
1,097,359	+				-0.7
1,097,360	-				+1.1
1,097,360	-				-0.1
1,097,360	-				-1.8
1,097,401	-				-2.8
1,097,439	-				+0.2
1,097,439	-				+0.2
1,097,581	+				-1.0
1,097,582	-				+0.4
1,097,590	-				+0.7
1,097,590	-				-0.3
1,097,590	-				-0.9
1,097,665	-				+0.2
1,097,665	-				-1.5
1,097,665	-				+0.0
1,097,665	-				-1.4
1,097,742	-				+0.6
1,097,742	-				+1.0
1,097,776	+				-0.7
1,097,777	-				-0.0
1,097,777	-				-0.1
1,097,777	-				-0.4
1,097,777	-				+0.7
1,097,777	-				+0.7
1,097,777	-				-0.6
1,097,777	-				+0.2
1,097,777	-				-0.1
1,097,777	-				+0.1
1,097,795	+				+1.8
1,097,796	-				-1.1
1,097,796	-				-0.9
1,097,807	+				+0.2
1,097,808	-				+0.2
1,097,808	-				+0.6
1,097,808	-				+0.3
1,097,808	-				+0.8
1,097,881	+				+0.8
1,097,881	+				+0.8
1,097,885	+				-0.9
1,097,885	+				-0.7
1,097,885	+				-0.1
1,097,886	-				+0.9
1,097,886	-				-1.7
1,097,886	-				-0.3
1,097,886	-				-1.8
1,097,886	-				-1.7
1,097,943	+				-0.6
1,097,944	-				+0.3
1,097,944	-				+0.0
1,097,982	+		Pf6N2E2_932	0.11	+0.0
1,097,983	-		Pf6N2E2_932	0.11	-1.0
1,098,006	+		Pf6N2E2_932	0.12	+1.0
1,098,006	+		Pf6N2E2_932	0.12	+0.5
1,098,007	-		Pf6N2E2_932	0.13	+0.0
1,098,095	+		Pf6N2E2_932	0.20	+0.1
1,098,096	-		Pf6N2E2_932	0.20	-1.1
1,098,147	-		Pf6N2E2_932	0.24	+1.6
1,098,190	+		Pf6N2E2_932	0.28	-0.7
1,098,190	+		Pf6N2E2_932	0.28	+0.4
1,098,191	-		Pf6N2E2_932	0.28	+0.6
1,098,191	-		Pf6N2E2_932	0.28	-0.7
1,098,191	-		Pf6N2E2_932	0.28	+0.7
1,098,191	-		Pf6N2E2_932	0.28	+0.2
1,098,191	-		Pf6N2E2_932	0.28	+0.5
1,098,203	+		Pf6N2E2_932	0.29	+1.3
1,098,203	+		Pf6N2E2_932	0.29	+1.5
1,098,204	-		Pf6N2E2_932	0.29	+0.4
1,098,204	-		Pf6N2E2_932	0.29	+0.4
1,098,204	-		Pf6N2E2_932	0.29	+0.1
1,098,207	+		Pf6N2E2_932	0.29	+1.0
1,098,207	+		Pf6N2E2_932	0.29	-0.3
1,098,207	+		Pf6N2E2_932	0.29	+0.8
1,098,207	+		Pf6N2E2_932	0.29	-0.8
1,098,207	+		Pf6N2E2_932	0.29	-0.3
1,098,208	-		Pf6N2E2_932	0.29	-0.3
1,098,208	-		Pf6N2E2_932	0.29	+0.0
1,098,246	+		Pf6N2E2_932	0.32	+0.3
1,098,246	+		Pf6N2E2_932	0.32	+1.0
1,098,264	+		Pf6N2E2_932	0.34	+0.1
1,098,264	+		Pf6N2E2_932	0.34	+0.8
1,098,264	+		Pf6N2E2_932	0.34	-0.3
1,098,264	+		Pf6N2E2_932	0.34	+0.7
1,098,265	-		Pf6N2E2_932	0.34	+0.6
1,098,362	+		Pf6N2E2_932	0.42	-0.3
1,098,362	+		Pf6N2E2_932	0.42	+0.3
1,098,362	+		Pf6N2E2_932	0.42	-0.0
1,098,363	-		Pf6N2E2_932	0.42	+1.6
1,098,363	-		Pf6N2E2_932	0.42	+1.8
1,098,363	-		Pf6N2E2_932	0.42	+1.1
1,098,363	-		Pf6N2E2_932	0.42	+0.9
1,098,363	-		Pf6N2E2_932	0.42	+1.1
1,098,408	+		Pf6N2E2_932	0.45	+1.4
1,098,408	+				+2.5
1,098,408	+		Pf6N2E2_932	0.45	+0.7
1,098,408	+		Pf6N2E2_932	0.45	-0.8
1,098,408	+		Pf6N2E2_932	0.45	+1.6
1,098,409	-		Pf6N2E2_932	0.46	+0.5
1,098,409	-		Pf6N2E2_932	0.46	+0.9
1,098,409	-		Pf6N2E2_932	0.46	+0.1
1,098,410	+		Pf6N2E2_932	0.46	+0.3
1,098,410	+		Pf6N2E2_932	0.46	+0.2
1,098,410	+		Pf6N2E2_932	0.46	-0.1
1,098,410	+		Pf6N2E2_932	0.46	-0.1
1,098,410	+		Pf6N2E2_932	0.46	-0.4
1,098,410	+		Pf6N2E2_932	0.46	+0.6
1,098,410	+		Pf6N2E2_932	0.46	+1.4
1,098,410	+		Pf6N2E2_932	0.46	-0.3
1,098,410	+		Pf6N2E2_932	0.46	+0.5
1,098,410	+		Pf6N2E2_932	0.46	+0.2
1,098,410	+		Pf6N2E2_932	0.46	+1.2
1,098,410	+		Pf6N2E2_932	0.46	+0.5
1,098,411	-		Pf6N2E2_932	0.46	+1.3
1,098,411	-		Pf6N2E2_932	0.46	-0.6
1,098,411	-		Pf6N2E2_932	0.46	-0.5
1,098,411	-		Pf6N2E2_932	0.46	-0.7
1,098,411	-		Pf6N2E2_932	0.46	-0.4
1,098,516	-		Pf6N2E2_932	0.54	+0.6
1,098,516	-		Pf6N2E2_932	0.54	+1.3
1,098,516	-		Pf6N2E2_932	0.54	+0.3
1,098,560	-		Pf6N2E2_932	0.58	-1.4
1,098,560	-		Pf6N2E2_932	0.58	-0.6
1,098,608	+				+0.2
1,098,609	-		Pf6N2E2_932	0.62	+0.3
1,098,665	-		Pf6N2E2_932	0.67	-0.5
1,098,746	+		Pf6N2E2_932	0.73	-0.0
1,098,747	-		Pf6N2E2_932	0.73	+1.9
1,098,747	-		Pf6N2E2_932	0.73	+0.8
1,098,989	+				+1.0
1,098,993	+				-1.4
1,099,109	+				+2.2
1,099,110	-				+0.6
1,099,169	+				-0.6
1,099,259	-				-0.1
1,099,260	+				-0.9
1,099,261	-				-0.9
1,099,261	-				+1.0
1,099,261	-				-0.3
1,099,261	-				+1.2
1,099,277	+				+1.4
1,099,396	+				+2.5
1,099,397	-				-0.0
1,099,534	-				-0.2
1,099,534	-				-1.8
1,099,545	+				+0.5
1,099,556	+				+0.9
1,099,557	-				+0.6
1,099,620	+		Pf6N2E2_933	0.17	-0.8
1,099,620	+		Pf6N2E2_933	0.17	+0.3
1,099,621	-		Pf6N2E2_933	0.18	-0.9
1,099,621	-		Pf6N2E2_933	0.18	+0.2
1,099,650	-		Pf6N2E2_933	0.22	+0.6
1,099,825	+		Pf6N2E2_933	0.50	-0.4
1,099,889	+		Pf6N2E2_933	0.61	-0.6
1,099,889	+		Pf6N2E2_933	0.61	+0.3