Experiment: MoLS4 minimal media with D,L-Cysteine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2799 and DvMF_2800 are separated by 155 nucleotides DvMF_2800 and DvMF_2801 overlap by 4 nucleotides DvMF_2801 and DvMF_2802 are separated by 385 nucleotides
DvMF_2799: DvMF_2799 - histone family protein DNA-binding protein (RefSeq), at 3,542,895 to 3,543,170
_2799
DvMF_2800: DvMF_2800 - hypothetical protein (RefSeq), at 3,543,326 to 3,543,733
_2800
DvMF_2801: DvMF_2801 - Hydroxypyruvate reductase (RefSeq), at 3,543,730 to 3,545,088
_2801
DvMF_2802: DvMF_2802 - transport-associated (RefSeq), at 3,545,474 to 3,546,028
_2802
Position (kb)
3543
3544
3545
3546 Strain fitness (log2 ratio)
-1
0
1 at 3542.788 kb on + strand at 3542.830 kb on - strand at 3543.043 kb on + strand, within DvMF_2799 at 3543.361 kb on - strand at 3543.383 kb on + strand, within DvMF_2800 at 3543.435 kb on + strand, within DvMF_2800 at 3543.440 kb on + strand, within DvMF_2800 at 3543.677 kb on - strand, within DvMF_2800 at 3543.677 kb on - strand, within DvMF_2800 at 3543.798 kb on - strand at 3543.803 kb on - strand at 3543.927 kb on - strand, within DvMF_2801 at 3544.290 kb on - strand, within DvMF_2801 at 3544.344 kb on + strand, within DvMF_2801 at 3544.436 kb on - strand, within DvMF_2801 at 3544.558 kb on + strand, within DvMF_2801 at 3544.670 kb on - strand, within DvMF_2801 at 3544.961 kb on - strand at 3544.983 kb on - strand at 3545.013 kb on - strand at 3545.060 kb on - strand at 3545.084 kb on - strand at 3545.128 kb on - strand at 3545.560 kb on + strand, within DvMF_2802 at 3545.603 kb on + strand, within DvMF_2802 at 3545.608 kb on + strand, within DvMF_2802 at 3545.642 kb on - strand, within DvMF_2802 at 3545.673 kb on + strand, within DvMF_2802 at 3545.680 kb on + strand, within DvMF_2802 at 3545.764 kb on + strand, within DvMF_2802 at 3545.764 kb on + strand, within DvMF_2802 at 3545.772 kb on - strand, within DvMF_2802 at 3545.772 kb on - strand, within DvMF_2802 at 3545.796 kb on + strand, within DvMF_2802 at 3545.860 kb on + strand, within DvMF_2802 at 3545.883 kb on + strand, within DvMF_2802 at 3545.883 kb on + strand, within DvMF_2802 at 3545.906 kb on - strand, within DvMF_2802 at 3545.914 kb on - strand, within DvMF_2802 at 3546.044 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with D,L-Cysteine remove 3,542,788 + +0.2 3,542,830 - +0.4 3,543,043 + DvMF_2799 0.54 +0.6 3,543,361 - -0.6 3,543,383 + DvMF_2800 0.14 +1.1 3,543,435 + DvMF_2800 0.27 +0.1 3,543,440 + DvMF_2800 0.28 -0.6 3,543,677 - DvMF_2800 0.86 -0.6 3,543,677 - DvMF_2800 0.86 -0.1 3,543,798 - +0.6 3,543,803 - -0.8 3,543,927 - DvMF_2801 0.14 -0.2 3,544,290 - DvMF_2801 0.41 -0.5 3,544,344 + DvMF_2801 0.45 -0.4 3,544,436 - DvMF_2801 0.52 -0.6 3,544,558 + DvMF_2801 0.61 +0.6 3,544,670 - DvMF_2801 0.69 -0.5 3,544,961 - -0.7 3,544,983 - -0.3 3,545,013 - -1.1 3,545,060 - +0.2 3,545,084 - -0.6 3,545,128 - -0.3 3,545,560 + DvMF_2802 0.15 -0.7 3,545,603 + DvMF_2802 0.23 +0.1 3,545,608 + DvMF_2802 0.24 -0.4 3,545,642 - DvMF_2802 0.30 -0.5 3,545,673 + DvMF_2802 0.36 -0.4 3,545,680 + DvMF_2802 0.37 +1.0 3,545,764 + DvMF_2802 0.52 -0.6 3,545,764 + DvMF_2802 0.52 -0.6 3,545,772 - DvMF_2802 0.54 -0.3 3,545,772 - DvMF_2802 0.54 +0.2 3,545,796 + DvMF_2802 0.58 -0.2 3,545,860 + DvMF_2802 0.70 -0.9 3,545,883 + DvMF_2802 0.74 -1.0 3,545,883 + DvMF_2802 0.74 -0.9 3,545,906 - DvMF_2802 0.78 +0.2 3,545,914 - DvMF_2802 0.79 -1.1 3,546,044 + -0.3
Or see this region's nucleotide sequence