Experiment: MoLS4 minimal media with D,L-Cysteine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2639 and DvMF_2640 are separated by 262 nucleotides DvMF_2640 and DvMF_2641 are separated by 247 nucleotides DvMF_2641 and DvMF_2642 are separated by 175 nucleotides
DvMF_2639: DvMF_2639 - hypothetical protein (RefSeq), at 3,337,135 to 3,337,593
_2639
DvMF_2640: DvMF_2640 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 3,337,856 to 3,340,723
_2640
DvMF_2641: DvMF_2641 - twin-arginine translocation protein, TatA/E family subunit (RefSeq), at 3,340,971 to 3,341,144
_2641
DvMF_2642: DvMF_2642 - hypothetical protein (RefSeq), at 3,341,320 to 3,342,693
_2642
Position (kb)
3337
3338
3339
3340
3341 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3336.900 kb on - strand at 3337.006 kb on + strand at 3337.238 kb on - strand, within DvMF_2639 at 3337.253 kb on - strand, within DvMF_2639 at 3337.271 kb on - strand, within DvMF_2639 at 3337.302 kb on - strand, within DvMF_2639 at 3338.012 kb on + strand at 3338.013 kb on - strand at 3338.183 kb on + strand, within DvMF_2640 at 3338.190 kb on + strand, within DvMF_2640 at 3338.323 kb on + strand, within DvMF_2640 at 3338.563 kb on - strand, within DvMF_2640 at 3338.707 kb on - strand, within DvMF_2640 at 3338.754 kb on + strand, within DvMF_2640 at 3338.804 kb on - strand, within DvMF_2640 at 3338.954 kb on + strand, within DvMF_2640 at 3339.136 kb on - strand, within DvMF_2640 at 3339.206 kb on + strand, within DvMF_2640 at 3339.214 kb on - strand, within DvMF_2640 at 3339.579 kb on - strand, within DvMF_2640 at 3339.579 kb on - strand, within DvMF_2640 at 3339.740 kb on + strand, within DvMF_2640 at 3339.905 kb on + strand, within DvMF_2640 at 3340.001 kb on + strand, within DvMF_2640 at 3340.204 kb on + strand, within DvMF_2640 at 3340.254 kb on - strand, within DvMF_2640 at 3340.349 kb on + strand, within DvMF_2640 at 3340.349 kb on + strand, within DvMF_2640 at 3340.429 kb on + strand, within DvMF_2640 at 3340.759 kb on + strand at 3341.216 kb on + strand at 3341.414 kb on + strand at 3341.482 kb on + strand, within DvMF_2642 at 3341.688 kb on + strand, within DvMF_2642 at 3341.695 kb on - strand, within DvMF_2642
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with D,L-Cysteine remove 3,336,900 - +0.1 3,337,006 + -1.2 3,337,238 - DvMF_2639 0.22 +0.1 3,337,253 - DvMF_2639 0.26 -1.0 3,337,271 - DvMF_2639 0.30 -0.6 3,337,302 - DvMF_2639 0.36 -0.3 3,338,012 + -3.5 3,338,013 - -0.8 3,338,183 + DvMF_2640 0.11 -0.8 3,338,190 + DvMF_2640 0.12 +0.5 3,338,323 + DvMF_2640 0.16 -1.1 3,338,563 - DvMF_2640 0.25 -0.7 3,338,707 - DvMF_2640 0.30 -1.9 3,338,754 + DvMF_2640 0.31 -0.4 3,338,804 - DvMF_2640 0.33 -1.6 3,338,954 + DvMF_2640 0.38 -0.6 3,339,136 - DvMF_2640 0.45 -0.9 3,339,206 + DvMF_2640 0.47 -0.8 3,339,214 - DvMF_2640 0.47 -1.2 3,339,579 - DvMF_2640 0.60 -0.8 3,339,579 - DvMF_2640 0.60 -1.1 3,339,740 + DvMF_2640 0.66 -1.4 3,339,905 + DvMF_2640 0.71 +0.9 3,340,001 + DvMF_2640 0.75 -1.5 3,340,204 + DvMF_2640 0.82 -0.5 3,340,254 - DvMF_2640 0.84 -0.7 3,340,349 + DvMF_2640 0.87 -1.1 3,340,349 + DvMF_2640 0.87 -0.8 3,340,429 + DvMF_2640 0.90 -0.6 3,340,759 + -0.9 3,341,216 + -1.3 3,341,414 + -0.1 3,341,482 + DvMF_2642 0.12 -0.5 3,341,688 + DvMF_2642 0.27 -0.7 3,341,695 - DvMF_2642 0.27 -0.7
Or see this region's nucleotide sequence