Experiment: MoLS4 minimal media with D,L-Cysteine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1619 and DvMF_1620 are separated by 35 nucleotides DvMF_1620 and DvMF_1621 are separated by 143 nucleotides
DvMF_1619: DvMF_1619 - flagellar hook-associated protein FlgK (RefSeq), at 1,994,374 to 1,996,446
_1619
DvMF_1620: DvMF_1620 - flagellar hook-associated protein 3 (RefSeq), at 1,996,482 to 1,997,975
_1620
DvMF_1621: DvMF_1621 - flagellar hook-associated protein 2 domain protein (RefSeq), at 1,998,119 to 1,999,858
_1621
Position (kb)
1996
1997
1998 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1995.496 kb on - strand, within DvMF_1619 at 1995.567 kb on - strand, within DvMF_1619 at 1995.641 kb on - strand, within DvMF_1619 at 1995.756 kb on + strand, within DvMF_1619 at 1995.781 kb on + strand, within DvMF_1619 at 1995.971 kb on + strand, within DvMF_1619 at 1995.979 kb on - strand, within DvMF_1619 at 1996.119 kb on + strand, within DvMF_1619 at 1996.155 kb on + strand, within DvMF_1619 at 1996.155 kb on + strand, within DvMF_1619 at 1996.155 kb on + strand, within DvMF_1619 at 1996.163 kb on - strand, within DvMF_1619 at 1996.403 kb on - strand at 1996.618 kb on - strand at 1996.623 kb on - strand at 1996.623 kb on - strand at 1996.626 kb on + strand at 1996.724 kb on - strand, within DvMF_1620 at 1996.815 kb on + strand, within DvMF_1620 at 1996.880 kb on - strand, within DvMF_1620 at 1996.923 kb on + strand, within DvMF_1620 at 1996.958 kb on - strand, within DvMF_1620 at 1996.970 kb on - strand, within DvMF_1620 at 1997.132 kb on - strand, within DvMF_1620 at 1997.137 kb on - strand, within DvMF_1620 at 1997.140 kb on + strand, within DvMF_1620 at 1997.287 kb on - strand, within DvMF_1620 at 1997.584 kb on + strand, within DvMF_1620 at 1997.644 kb on + strand, within DvMF_1620 at 1997.662 kb on - strand, within DvMF_1620 at 1997.752 kb on - strand, within DvMF_1620 at 1997.849 kb on + strand at 1998.024 kb on + strand at 1998.163 kb on - strand at 1998.220 kb on + strand at 1998.304 kb on + strand, within DvMF_1621 at 1998.312 kb on - strand, within DvMF_1621 at 1998.312 kb on - strand, within DvMF_1621 at 1998.423 kb on + strand, within DvMF_1621 at 1998.509 kb on + strand, within DvMF_1621 at 1998.528 kb on + strand, within DvMF_1621 at 1998.549 kb on + strand, within DvMF_1621 at 1998.556 kb on - strand, within DvMF_1621 at 1998.861 kb on + strand, within DvMF_1621
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with D,L-Cysteine remove 1,995,496 - DvMF_1619 0.54 -1.1 1,995,567 - DvMF_1619 0.58 -0.1 1,995,641 - DvMF_1619 0.61 +0.4 1,995,756 + DvMF_1619 0.67 -0.5 1,995,781 + DvMF_1619 0.68 -0.4 1,995,971 + DvMF_1619 0.77 -0.3 1,995,979 - DvMF_1619 0.77 -0.2 1,996,119 + DvMF_1619 0.84 -0.4 1,996,155 + DvMF_1619 0.86 -0.8 1,996,155 + DvMF_1619 0.86 -1.7 1,996,155 + DvMF_1619 0.86 -0.4 1,996,163 - DvMF_1619 0.86 -0.4 1,996,403 - -0.4 1,996,618 - -0.7 1,996,623 - -1.3 1,996,623 - -0.5 1,996,626 + -0.8 1,996,724 - DvMF_1620 0.16 -0.8 1,996,815 + DvMF_1620 0.22 -1.2 1,996,880 - DvMF_1620 0.27 -0.6 1,996,923 + DvMF_1620 0.30 -0.4 1,996,958 - DvMF_1620 0.32 -0.2 1,996,970 - DvMF_1620 0.33 -1.1 1,997,132 - DvMF_1620 0.44 -0.5 1,997,137 - DvMF_1620 0.44 -1.0 1,997,140 + DvMF_1620 0.44 -0.7 1,997,287 - DvMF_1620 0.54 -3.3 1,997,584 + DvMF_1620 0.74 -0.3 1,997,644 + DvMF_1620 0.78 -1.5 1,997,662 - DvMF_1620 0.79 +0.1 1,997,752 - DvMF_1620 0.85 -0.5 1,997,849 + -0.7 1,998,024 + -0.4 1,998,163 - -0.8 1,998,220 + -0.5 1,998,304 + DvMF_1621 0.11 -0.8 1,998,312 - DvMF_1621 0.11 -0.3 1,998,312 - DvMF_1621 0.11 -0.4 1,998,423 + DvMF_1621 0.17 -0.4 1,998,509 + DvMF_1621 0.22 -0.3 1,998,528 + DvMF_1621 0.24 -1.0 1,998,549 + DvMF_1621 0.25 -0.9 1,998,556 - DvMF_1621 0.25 -0.2 1,998,861 + DvMF_1621 0.43 -0.0
Or see this region's nucleotide sequence