Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1003

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
1,097,301	+				+0.3
1,097,309	-				+0.0
1,097,336	-				+0.0
1,097,380	-				-0.1
1,097,478	+	b0965	DVU1001	0.12	+0.2
1,097,573	-	b0965	DVU1001	0.36	+0.7
1,097,575	+	b0965	DVU1001	0.36	+0.2
1,097,589	+	b0965	DVU1001	0.40	+1.3
1,097,682	-	b0965	DVU1001	0.63	+0.0
1,097,729	+	b0965	DVU1001	0.74	+0.3
1,097,737	-	b0965	DVU1001	0.76	+0.2
1,097,737	-	b0965	DVU1001	0.76	-1.0
1,097,768	-	b0965	DVU1001	0.84	-0.2
1,097,768	-	b0965	DVU1001	0.84	-0.2
1,097,768	-	b0965	DVU1001	0.84	-0.0
1,097,781	+	b0965	DVU1001	0.87	+0.1
1,097,792	+				+0.4
1,097,843	+				-0.2
1,097,896	+		DVU1002	0.15	-0.3
1,097,943	+		DVU1002	0.25	-0.8
1,097,943	+		DVU1002	0.25	-0.4
1,097,943	+		DVU1002	0.25	-0.7
1,097,943	+		DVU1002	0.25	+0.3
1,097,943	+		DVU1002	0.25	+0.1
1,097,943	+		DVU1002	0.25	-0.2
1,097,945	+		DVU1002	0.25	-0.9
1,097,951	-		DVU1002	0.27	-0.3
1,097,951	-		DVU1002	0.27	-0.7
1,097,951	-		DVU1002	0.27	+0.0
1,098,020	-		DVU1002	0.42	+0.1
1,098,040	+		DVU1002	0.46	-0.2
1,098,045	+		DVU1002	0.47	+0.2
1,098,053	-		DVU1002	0.49	-0.4
1,098,053	-		DVU1002	0.49	+0.0
1,098,130	+		DVU1002	0.66	+0.1
1,098,201	+		DVU1002	0.82	-0.1
1,098,226	+		DVU1002	0.87	-0.5
1,098,227	-		DVU1002	0.87	-0.1
1,098,255	-				+0.1
1,098,332	-				-0.4
1,098,410	-		DVU1003	0.11	+0.3
1,098,548	-		DVU1003	0.25	+0.5
1,098,570	-		DVU1003	0.27	+0.5
1,098,612	-		DVU1003	0.32	+0.3
1,098,675	+		DVU1003	0.38	-0.3
1,098,683	-		DVU1003	0.39	+0.2
1,098,742	+		DVU1003	0.45	+0.2
1,098,766	-		DVU1003	0.47	+1.1
1,098,843	+		DVU1003	0.55	+0.4
1,098,904	-		DVU1003	0.61	+0.6
1,099,040	+		DVU1003	0.75	+0.6
1,099,136	+		DVU1003	0.85	-0.4
1,099,164	-		DVU1003	0.88	+0.5
1,099,164	-		DVU1003	0.88	-0.8
1,099,279	+				-0.4
1,099,286	+				-0.1
1,099,288	-				-0.5
1,099,349	+				-0.1
1,099,393	+				-2.1
1,099,393	+				-0.3
1,099,401	-				+0.6
1,099,406	+				+0.1
1,099,409	-				+0.7
1,099,415	+				-0.3
1,099,464	+				-0.5
1,099,475	+				+0.2
1,099,483	-				-0.8
1,099,504	+				-0.3
1,099,513	-				-0.3
1,099,515	+				-0.4
1,099,551	+		DVU1004	0.14	-0.4
1,099,592	-		DVU1004	0.19	-0.5
1,099,675	+		DVU1004	0.28	-0.4
1,099,675	+		DVU1004	0.28	-0.0
1,099,776	+		DVU1004	0.39	-0.4
1,099,822	+		DVU1004	0.45	-0.1
1,099,910	+		DVU1004	0.55	-0.4
1,100,016	+		DVU1004	0.67	-0.5
1,100,024	-		DVU1004	0.67	+0.5
1,100,024	-		DVU1004	0.67	-0.4
1,100,038	+		DVU1004	0.69	+0.2
1,100,059	-		DVU1004	0.71	-0.4
1,100,061	+		DVU1004	0.72	-0.1
1,100,076	-		DVU1004	0.73	+0.1
1,100,172	+		DVU1004	0.84	-0.3
1,100,180	-		DVU1004	0.85	-0.5
1,100,213	+		DVU1004	0.89	-0.1
1,100,213	+		DVU1004	0.89	-0.1
1,100,222	+		DVU1004	0.90	-0.7
1,100,268	+				+0.7