Experiment: Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24020 and BWI76_RS24025 are separated by 133 nucleotides BWI76_RS24025 and BWI76_RS24030 are separated by 211 nucleotides
BWI76_RS24020: BWI76_RS24020 - peptidase M48, at 5,013,336 to 5,014,094
_RS24020
BWI76_RS24025: BWI76_RS24025 - agmatinase, at 5,014,228 to 5,015,148
_RS24025
BWI76_RS24030: BWI76_RS24030 - arginine decarboxylase, at 5,015,360 to 5,017,336
_RS24030
Position (kb) 5014
5015
5016 Strain fitness (log2 ratio) -2
-1
0
1 at 5013.231 kb on - strand at 5013.271 kb on + strand at 5013.271 kb on + strand at 5013.271 kb on + strand at 5013.271 kb on + strand at 5013.271 kb on + strand at 5013.271 kb on + strand at 5013.279 kb on - strand at 5013.416 kb on + strand, within BWI76_RS24020 at 5013.592 kb on - strand, within BWI76_RS24020 at 5013.612 kb on - strand, within BWI76_RS24020 at 5013.614 kb on + strand, within BWI76_RS24020 at 5013.629 kb on + strand, within BWI76_RS24020 at 5013.746 kb on + strand, within BWI76_RS24020 at 5013.867 kb on + strand, within BWI76_RS24020 at 5014.053 kb on - strand at 5014.055 kb on + strand at 5014.061 kb on - strand at 5014.135 kb on + strand at 5014.135 kb on + strand at 5014.152 kb on + strand at 5014.443 kb on + strand, within BWI76_RS24025 at 5014.495 kb on + strand, within BWI76_RS24025 at 5014.605 kb on - strand, within BWI76_RS24025 at 5014.643 kb on + strand, within BWI76_RS24025 at 5014.643 kb on + strand, within BWI76_RS24025 at 5014.643 kb on + strand, within BWI76_RS24025 at 5014.651 kb on - strand, within BWI76_RS24025 at 5014.891 kb on - strand, within BWI76_RS24025 at 5015.150 kb on + strand at 5015.644 kb on + strand, within BWI76_RS24030 at 5016.002 kb on - strand, within BWI76_RS24030 at 5016.088 kb on - strand, within BWI76_RS24030
Per-strain Table
Position Strand Gene LocusTag Fraction Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM remove 5,013,231 - +0.2 5,013,271 + +0.2 5,013,271 + -0.4 5,013,271 + +0.1 5,013,271 + -0.2 5,013,271 + -0.9 5,013,271 + -0.4 5,013,279 - +0.1 5,013,416 + BWI76_RS24020 0.11 -0.8 5,013,592 - BWI76_RS24020 0.34 +0.7 5,013,612 - BWI76_RS24020 0.36 +0.0 5,013,614 + BWI76_RS24020 0.37 +0.0 5,013,629 + BWI76_RS24020 0.39 +1.6 5,013,746 + BWI76_RS24020 0.54 +0.1 5,013,867 + BWI76_RS24020 0.70 -1.0 5,014,053 - -0.2 5,014,055 + -0.5 5,014,061 - -0.0 5,014,135 + -0.3 5,014,135 + -0.1 5,014,152 + -0.3 5,014,443 + BWI76_RS24025 0.23 -2.2 5,014,495 + BWI76_RS24025 0.29 -0.6 5,014,605 - BWI76_RS24025 0.41 -1.8 5,014,643 + BWI76_RS24025 0.45 -1.5 5,014,643 + BWI76_RS24025 0.45 -1.3 5,014,643 + BWI76_RS24025 0.45 -1.2 5,014,651 - BWI76_RS24025 0.46 -2.4 5,014,891 - BWI76_RS24025 0.72 -1.8 5,015,150 + -0.9 5,015,644 + BWI76_RS24030 0.14 +0.2 5,016,002 - BWI76_RS24030 0.32 -0.1 5,016,088 - BWI76_RS24030 0.37 +0.9
Or see this region's nucleotide sequence